Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
HMGCLP35914 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.18■□□□□ 0.02
HMGCLP35914 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
HMGCLP35914 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGCLP35914 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.18■□□□□ 0.02
HMGCLP35914 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.18■□□□□ 0.02
HMGCLP35914 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.18■□□□□ 0.02
HMGCLP35914 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGCLP35914 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.18■□□□□ 0.02
HMGCLP35914 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGCLP35914 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGCLP35914 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
HMGCLP35914 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.17■□□□□ 0.02
HMGCLP35914 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
HMGCLP35914 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.17■□□□□ 0.02
HMGCLP35914 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
HMGCLP35914 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
HMGCLP35914 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HMGCLP35914 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
HMGCLP35914 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.17■□□□□ 0.02
HMGCLP35914 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.17■□□□□ 0.02
HMGCLP35914 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.17■□□□□ 0.02
HMGCLP35914 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.17■□□□□ 0.02
HMGCLP35914 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
HMGCLP35914 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
HMGCLP35914 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.17■□□□□ 0.02
HMGCLP35914 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 EIF3FP3-201ENST00000434851 1086 ntBASIC15.17■□□□□ 0.02
HMGCLP35914 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.17■□□□□ 0.02
HMGCLP35914 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.17■□□□□ 0.02
HMGCLP35914 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.17■□□□□ 0.02
HMGCLP35914 GAPDHP21-201ENST00000450301 1010 ntBASIC15.17■□□□□ 0.02
HMGCLP35914 KRT17P7-201ENST00000451704 1104 ntBASIC15.17■□□□□ 0.02
HMGCLP35914 USP32P1-208ENST00000506594 1164 ntBASIC15.17■□□□□ 0.02
HMGCLP35914 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.17■□□□□ 0.02
HMGCLP35914 AP001889.1-201ENST00000525414 633 ntBASIC15.17■□□□□ 0.02
HMGCLP35914 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.17■□□□□ 0.02
HMGCLP35914 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.17■□□□□ 0.02
HMGCLP35914 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.17■□□□□ 0.02
HMGCLP35914 AC008735.3-201ENST00000596646 500 ntBASIC15.17■□□□□ 0.02
HMGCLP35914 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.17■□□□□ 0.02
HMGCLP35914 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
HMGCLP35914 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.17■□□□□ 0.02
HMGCLP35914 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
HMGCLP35914 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HMGCLP35914 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGCLP35914 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGCLP35914 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.16■□□□□ 0.02
HMGCLP35914 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HMGCLP35914 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.16■□□□□ 0.02
HMGCLP35914 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
HMGCLP35914 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HMGCLP35914 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.16■□□□□ 0.02
HMGCLP35914 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGCLP35914 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGCLP35914 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGCLP35914 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGCLP35914 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HMGCLP35914 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGCLP35914 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
HMGCLP35914 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.16■□□□□ 0.02
HMGCLP35914 SLC25A47P1-201ENST00000531577 414 ntBASIC15.16■□□□□ 0.02
HMGCLP35914 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.16■□□□□ 0.02
HMGCLP35914 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.16■□□□□ 0.02
HMGCLP35914 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.16■□□□□ 0.02
HMGCLP35914 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.16■□□□□ 0.02
HMGCLP35914 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGCLP35914 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.16■□□□□ 0.02
HMGCLP35914 AC233724.13-201ENST00000598383 410 ntBASIC15.16■□□□□ 0.02
HMGCLP35914 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.16■□□□□ 0.02
HMGCLP35914 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGCLP35914 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.16■□□□□ 0.02
HMGCLP35914 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGCLP35914 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HMGCLP35914 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGCLP35914 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGCLP35914 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGCLP35914 AC055811.4-201ENST00000624039 1754 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms