Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PDE6BP35913 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6BP35913 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6BP35913 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6BP35913 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6BP35913 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PDE6BP35913 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.6■□□□□ 0.57
PDE6BP35913 AC084018.2-201ENST00000613093 2607 ntBASIC18.6■□□□□ 0.57
PDE6BP35913 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6BP35913 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6BP35913 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC18.6■□□□□ 0.57
PDE6BP35913 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6BP35913 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6BP35913 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6BP35913 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE6BP35913 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.59■□□□□ 0.57
PDE6BP35913 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE6BP35913 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE6BP35913 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE6BP35913 KRT8P21-201ENST00000430398 1491 ntBASIC18.59■□□□□ 0.57
PDE6BP35913 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.59■□□□□ 0.57
PDE6BP35913 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE6BP35913 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE6BP35913 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE6BP35913 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE6BP35913 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE6BP35913 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC18.59■□□□□ 0.57
PDE6BP35913 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE6BP35913 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE6BP35913 RPS9P1-201ENST00000419943 583 ntBASIC18.59■□□□□ 0.57
PDE6BP35913 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDE6BP35913 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC18.59■□□□□ 0.57
PDE6BP35913 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE6BP35913 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC18.59■□□□□ 0.57
PDE6BP35913 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PDE6BP35913 AL031713.1-201ENST00000564813 661 ntBASIC18.59■□□□□ 0.57
PDE6BP35913 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC18.59■□□□□ 0.57
PDE6BP35913 AC005962.1-201ENST00000584100 773 ntBASIC18.59■□□□□ 0.57
PDE6BP35913 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC18.59■□□□□ 0.57
PDE6BP35913 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC18.59■□□□□ 0.57
PDE6BP35913 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE6BP35913 CICP6-201ENST00000457191 2729 ntBASIC18.59■□□□□ 0.57
PDE6BP35913 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE6BP35913 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE6BP35913 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE6BP35913 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PDE6BP35913 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDE6BP35913 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PDE6BP35913 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.58■□□□□ 0.57
PDE6BP35913 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.58■□□□□ 0.57
PDE6BP35913 AD000864.1-201ENST00000624076 2295 ntBASIC18.58■□□□□ 0.57
PDE6BP35913 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PDE6BP35913 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDE6BP35913 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDE6BP35913 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
PDE6BP35913 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PDE6BP35913 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.58■□□□□ 0.57
PDE6BP35913 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDE6BP35913 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PDE6BP35913 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.58■□□□□ 0.57
PDE6BP35913 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PDE6BP35913 AL391005.1-201ENST00000623953 2435 ntBASIC18.58■□□□□ 0.57
PDE6BP35913 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.58■□□□□ 0.56
PDE6BP35913 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.58■□□□□ 0.56
PDE6BP35913 AC008723.1-201ENST00000506922 207 ntBASIC18.58■□□□□ 0.56
PDE6BP35913 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC18.58■□□□□ 0.56
PDE6BP35913 AP002803.1-201ENST00000528836 498 ntBASIC18.58■□□□□ 0.56
PDE6BP35913 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PDE6BP35913 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
PDE6BP35913 DNM1P30-201ENST00000563586 452 ntBASIC18.58■□□□□ 0.56
PDE6BP35913 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.58■□□□□ 0.56
PDE6BP35913 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDE6BP35913 YRDCP1-201ENST00000621419 643 ntBASIC18.58■□□□□ 0.56
PDE6BP35913 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PDE6BP35913 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.58■□□□□ 0.56
PDE6BP35913 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDE6BP35913 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDE6BP35913 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
PDE6BP35913 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
PDE6BP35913 AL662844.4-201ENST00000606367 2838 ntBASIC18.58■□□□□ 0.56
PDE6BP35913 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.57■□□□□ 0.56
PDE6BP35913 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PDE6BP35913 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6BP35913 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6BP35913 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6BP35913 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6BP35913 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.57■□□□□ 0.56
PDE6BP35913 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6BP35913 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PDE6BP35913 AL138725.1-201ENST00000407347 1314 ntBASIC18.57■□□□□ 0.56
PDE6BP35913 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PDE6BP35913 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6BP35913 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.57■□□□□ 0.56
PDE6BP35913 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6BP35913 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6BP35913 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6BP35913 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.57■□□□□ 0.56
PDE6BP35913 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE6BP35913 OR2K2-202ENST00000374428 1038 ntBASIC18.57■□□□□ 0.56
PDE6BP35913 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms