Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 AC004790.1-201ENST00000612686 536 ntBASIC14.69□□□□□ -0.06
PTX3P26022 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.69□□□□□ -0.06
PTX3P26022 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 SLC7A15P-201ENST00000424028 1363 ntBASIC14.69□□□□□ -0.06
PTX3P26022 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
PTX3P26022 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PTX3P26022 ACE3P-201ENST00000423435 1973 ntBASIC14.69□□□□□ -0.06
PTX3P26022 GRK6P1-201ENST00000400595 1711 ntBASIC14.69□□□□□ -0.06
PTX3P26022 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PTX3P26022 AC232323.1-201ENST00000540724 2099 ntBASIC14.69□□□□□ -0.06
PTX3P26022 REXO1L5P-201ENST00000622260 2098 ntBASIC14.69□□□□□ -0.06
PTX3P26022 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.69□□□□□ -0.06
PTX3P26022 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
PTX3P26022 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
PTX3P26022 AC007787.1-201ENST00000588095 1583 ntBASIC14.68□□□□□ -0.06
PTX3P26022 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.68□□□□□ -0.06
PTX3P26022 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.68□□□□□ -0.06
PTX3P26022 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.68□□□□□ -0.06
PTX3P26022 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
PTX3P26022 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PTX3P26022 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PTX3P26022 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PTX3P26022 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.68□□□□□ -0.06
PTX3P26022 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.68□□□□□ -0.06
PTX3P26022 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PTX3P26022 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
PTX3P26022 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.68□□□□□ -0.06
PTX3P26022 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.68□□□□□ -0.06
PTX3P26022 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.68□□□□□ -0.06
PTX3P26022 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PTX3P26022 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.68□□□□□ -0.06
PTX3P26022 SPTLC1P1-201ENST00000447199 261 ntBASIC14.68□□□□□ -0.06
PTX3P26022 TSPY16P-201ENST00000449843 468 ntBASIC14.68□□□□□ -0.06
PTX3P26022 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.68□□□□□ -0.06
PTX3P26022 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.68□□□□□ -0.06
PTX3P26022 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.68□□□□□ -0.06
PTX3P26022 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.68□□□□□ -0.06
PTX3P26022 AL662799.1-202ENST00000614205 422 ntBASIC14.68□□□□□ -0.06
PTX3P26022 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PTX3P26022 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PTX3P26022 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 AL391825.1-201ENST00000457671 1364 ntBASIC14.68□□□□□ -0.06
PTX3P26022 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.68□□□□□ -0.06
PTX3P26022 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 AL138799.1-201ENST00000448213 1675 ntBASIC14.68□□□□□ -0.06
PTX3P26022 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.68□□□□□ -0.06
PTX3P26022 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTX3P26022 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.68□□□□□ -0.06
PTX3P26022 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PTX3P26022 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.67□□□□□ -0.06
PTX3P26022 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.67□□□□□ -0.06
PTX3P26022 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PTX3P26022 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PTX3P26022 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.67□□□□□ -0.06
PTX3P26022 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.67□□□□□ -0.06
PTX3P26022 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms