Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.66■□□□□ 0.26
RFX1P22670 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX1P22670 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.66■□□□□ 0.26
RFX1P22670 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
RFX1P22670 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX1P22670 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
RFX1P22670 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX1P22670 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.66■□□□□ 0.26
RFX1P22670 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.66■□□□□ 0.26
RFX1P22670 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.66■□□□□ 0.26
RFX1P22670 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RFX1P22670 CROCCP4-201ENST00000457096 498 ntBASIC16.66■□□□□ 0.26
RFX1P22670 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
RFX1P22670 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RFX1P22670 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.66■□□□□ 0.26
RFX1P22670 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.66■□□□□ 0.26
RFX1P22670 WFDC1-204ENST00000613603 549 ntBASIC16.66■□□□□ 0.26
RFX1P22670 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RFX1P22670 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RFX1P22670 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.66■□□□□ 0.26
RFX1P22670 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.66■□□□□ 0.26
RFX1P22670 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX1P22670 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX1P22670 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX1P22670 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX1P22670 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX1P22670 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX1P22670 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RFX1P22670 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RFX1P22670 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RFX1P22670 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RFX1P22670 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RFX1P22670 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX1P22670 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX1P22670 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFX1P22670 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFX1P22670 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.65■□□□□ 0.26
RFX1P22670 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.65■□□□□ 0.26
RFX1P22670 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFX1P22670 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RFX1P22670 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFX1P22670 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
RFX1P22670 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFX1P22670 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFX1P22670 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFX1P22670 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RFX1P22670 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.65■□□□□ 0.26
RFX1P22670 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RFX1P22670 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFX1P22670 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFX1P22670 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFX1P22670 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFX1P22670 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.65■□□□□ 0.26
RFX1P22670 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.65■□□□□ 0.26
RFX1P22670 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RFX1P22670 SNX29P1-201ENST00000548357 1007 ntBASIC16.65■□□□□ 0.26
RFX1P22670 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.65■□□□□ 0.26
RFX1P22670 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.65■□□□□ 0.26
RFX1P22670 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.65■□□□□ 0.26
RFX1P22670 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.65■□□□□ 0.26
RFX1P22670 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.65■□□□□ 0.26
RFX1P22670 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.65■□□□□ 0.26
RFX1P22670 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFX1P22670 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RFX1P22670 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RFX1P22670 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFX1P22670 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFX1P22670 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
RFX1P22670 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFX1P22670 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFX1P22670 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RFX1P22670 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.64■□□□□ 0.26
RFX1P22670 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RFX1P22670 RN7SL832P-201ENST00000607781 1756 ntBASIC16.64■□□□□ 0.25
RFX1P22670 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX1P22670 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX1P22670 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RFX1P22670 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFX1P22670 LINC00528-201ENST00000600723 2160 ntBASIC16.64■□□□□ 0.25
RFX1P22670 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFX1P22670 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RFX1P22670 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFX1P22670 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RFX1P22670 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX1P22670 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX1P22670 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.64■□□□□ 0.25
RFX1P22670 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFX1P22670 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFX1P22670 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.64■□□□□ 0.25
RFX1P22670 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
RFX1P22670 ACTBP11-201ENST00000436287 1126 ntBASIC16.64■□□□□ 0.25
RFX1P22670 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFX1P22670 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.64■□□□□ 0.25
RFX1P22670 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RFX1P22670 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFX1P22670 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.64■□□□□ 0.25
RFX1P22670 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.64■□□□□ 0.25
RFX1P22670 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.64■□□□□ 0.25
RFX1P22670 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.64■□□□□ 0.25
RFX1P22670 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms