Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.07■□□□□ 0
CDH3P22223 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.07■□□□□ 0
CDH3P22223 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.07■□□□□ 0
CDH3P22223 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CDH3P22223 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.07■□□□□ 0
CDH3P22223 AC133539.2-201ENST00000604757 467 ntBASIC15.07■□□□□ 0
CDH3P22223 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.07■□□□□ 0
CDH3P22223 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.07■□□□□ 0
CDH3P22223 AL033527.5-201ENST00000641382 801 ntBASIC15.07■□□□□ 0
CDH3P22223 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.07■□□□□ 0
CDH3P22223 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CDH3P22223 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.07■□□□□ 0
CDH3P22223 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CDH3P22223 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.06■□□□□ 0
CDH3P22223 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH3P22223 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CDH3P22223 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.06■□□□□ 0
CDH3P22223 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CDH3P22223 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH3P22223 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH3P22223 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH3P22223 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CDH3P22223 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH3P22223 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH3P22223 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CDH3P22223 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.06■□□□□ 0
CDH3P22223 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH3P22223 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CDH3P22223 AL442647.2-201ENST00000429864 857 ntBASIC15.06■□□□□ 0
CDH3P22223 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.06■□□□□ 0
CDH3P22223 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.06■□□□□ 0
CDH3P22223 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.06■□□□□ 0
CDH3P22223 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.06■□□□□ 0
CDH3P22223 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.06■□□□□ 0
CDH3P22223 GIMAP3P-201ENST00000495150 836 ntBASIC15.06■□□□□ 0
CDH3P22223 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH3P22223 AC132938.2-201ENST00000579188 680 ntBASIC15.06■□□□□ 0
CDH3P22223 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.06■□□□□ 0
CDH3P22223 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH3P22223 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.06■□□□□ 0
CDH3P22223 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.06■□□□□ 0
CDH3P22223 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.06■□□□□ 0
CDH3P22223 AL591163.1-201ENST00000641757 987 ntBASIC15.06■□□□□ 0
CDH3P22223 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH3P22223 AC005252.3-201ENST00000623855 2258 ntBASIC15.06■□□□□ 0
CDH3P22223 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CDH3P22223 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.06■□□□□ 0
CDH3P22223 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.06■□□□□ 0
CDH3P22223 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.06■□□□□ 0
CDH3P22223 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
CDH3P22223 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH3P22223 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH3P22223 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH3P22223 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.06■□□□□ 0
CDH3P22223 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
CDH3P22223 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.06■□□□□ 0
CDH3P22223 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.06■□□□□ 0
CDH3P22223 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH3P22223 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.05■□□□□ 0
CDH3P22223 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CDH3P22223 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CDH3P22223 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.05■□□□□ 0
CDH3P22223 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.05■□□□□ 0
CDH3P22223 AC005840.4-201ENST00000541242 2494 ntBASIC15.05■□□□□ 0
CDH3P22223 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.05■□□□□ 0
CDH3P22223 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CDH3P22223 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CDH3P22223 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CDH3P22223 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CDH3P22223 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.05■□□□□ -0
CDH3P22223 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CDH3P22223 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH3P22223 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CDH3P22223 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.05■□□□□ -0
CDH3P22223 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH3P22223 AL133267.1-201ENST00000398220 340 ntBASIC15.05■□□□□ -0
CDH3P22223 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.05■□□□□ -0
CDH3P22223 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.05■□□□□ -0
CDH3P22223 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.05■□□□□ -0
CDH3P22223 RN7SL837P-201ENST00000463010 287 ntBASIC15.05■□□□□ -0
CDH3P22223 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.05■□□□□ -0
CDH3P22223 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.05■□□□□ -0
CDH3P22223 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.05■□□□□ -0
CDH3P22223 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.05■□□□□ -0
CDH3P22223 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.05■□□□□ -0
CDH3P22223 AL049840.4-201ENST00000602422 811 ntBASIC15.05■□□□□ -0
CDH3P22223 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CDH3P22223 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH3P22223 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms