Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN3P20807 NME2P1-201ENST00000426182 414 ntBASIC14.77□□□□□ -0.05
CAPN3P20807 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.77□□□□□ -0.05
CAPN3P20807 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.77□□□□□ -0.05
CAPN3P20807 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.77□□□□□ -0.05
CAPN3P20807 IGHV3-42-201ENST00000520410 361 ntBASIC14.77□□□□□ -0.05
CAPN3P20807 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.77□□□□□ -0.05
CAPN3P20807 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.77□□□□□ -0.05
CAPN3P20807 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.77□□□□□ -0.05
CAPN3P20807 AC015910.1-201ENST00000579400 975 ntBASIC14.77□□□□□ -0.05
CAPN3P20807 AL158211.3-201ENST00000607385 239 ntBASIC14.77□□□□□ -0.05
CAPN3P20807 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CAPN3P20807 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CAPN3P20807 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.77□□□□□ -0.05
CAPN3P20807 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN3P20807 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN3P20807 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.77□□□□□ -0.05
CAPN3P20807 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN3P20807 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CAPN3P20807 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN3P20807 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN3P20807 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.77□□□□□ -0.05
CAPN3P20807 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
CAPN3P20807 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN3P20807 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN3P20807 AC018442.1-201ENST00000421439 2061 ntBASIC14.77□□□□□ -0.05
CAPN3P20807 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CAPN3P20807 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CAPN3P20807 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.76□□□□□ -0.05
CAPN3P20807 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN3P20807 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN3P20807 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN3P20807 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
CAPN3P20807 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.76□□□□□ -0.05
CAPN3P20807 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.76□□□□□ -0.05
CAPN3P20807 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CAPN3P20807 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN3P20807 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN3P20807 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN3P20807 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN3P20807 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CAPN3P20807 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.76□□□□□ -0.05
CAPN3P20807 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.76□□□□□ -0.05
CAPN3P20807 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN3P20807 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN3P20807 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN3P20807 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN3P20807 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN3P20807 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN3P20807 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN3P20807 MIR661-201ENST00000384842 89 ntBASIC14.76□□□□□ -0.05
CAPN3P20807 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CAPN3P20807 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN3P20807 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.76□□□□□ -0.05
CAPN3P20807 PIN1P1-201ENST00000412108 996 ntBASIC14.76□□□□□ -0.05
CAPN3P20807 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.76□□□□□ -0.05
CAPN3P20807 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.76□□□□□ -0.05
CAPN3P20807 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.76□□□□□ -0.05
CAPN3P20807 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.76□□□□□ -0.05
CAPN3P20807 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
CAPN3P20807 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN3P20807 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN3P20807 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.76□□□□□ -0.05
CAPN3P20807 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.76□□□□□ -0.05
CAPN3P20807 AL133215.2-201ENST00000609242 977 ntBASIC14.76□□□□□ -0.05
CAPN3P20807 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CAPN3P20807 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN3P20807 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
CAPN3P20807 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CAPN3P20807 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CAPN3P20807 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.76□□□□□ -0.05
CAPN3P20807 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN3P20807 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CAPN3P20807 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN3P20807 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN3P20807 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CAPN3P20807 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN3P20807 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CAPN3P20807 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN3P20807 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CAPN3P20807 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN3P20807 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.75□□□□□ -0.05
CAPN3P20807 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CAPN3P20807 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN3P20807 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN3P20807 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN3P20807 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN3P20807 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN3P20807 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN3P20807 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CAPN3P20807 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CAPN3P20807 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.75□□□□□ -0.05
CAPN3P20807 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.75□□□□□ -0.05
CAPN3P20807 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.75□□□□□ -0.05
CAPN3P20807 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.75□□□□□ -0.05
CAPN3P20807 MEIS3P1-201ENST00000495167 958 ntBASIC14.75□□□□□ -0.05
CAPN3P20807 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.75□□□□□ -0.05
CAPN3P20807 ALG1L8P-201ENST00000533887 760 ntBASIC14.75□□□□□ -0.05
CAPN3P20807 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.75□□□□□ -0.05
CAPN3P20807 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 355.7 ms