Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERCC2P18074 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.71■□□□□ 0.11
ERCC2P18074 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.71■□□□□ 0.11
ERCC2P18074 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERCC2P18074 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.71■□□□□ 0.11
ERCC2P18074 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ERCC2P18074 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ERCC2P18074 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.71■□□□□ 0.11
ERCC2P18074 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ERCC2P18074 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.71■□□□□ 0.11
ERCC2P18074 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.71■□□□□ 0.11
ERCC2P18074 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERCC2P18074 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.71■□□□□ 0.11
ERCC2P18074 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.71■□□□□ 0.11
ERCC2P18074 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERCC2P18074 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERCC2P18074 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERCC2P18074 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERCC2P18074 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERCC2P18074 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
ERCC2P18074 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.71■□□□□ 0.11
ERCC2P18074 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERCC2P18074 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ERCC2P18074 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
ERCC2P18074 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ERCC2P18074 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.71■□□□□ 0.1
ERCC2P18074 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.71■□□□□ 0.1
ERCC2P18074 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ERCC2P18074 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ERCC2P18074 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
ERCC2P18074 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ERCC2P18074 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ERCC2P18074 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
ERCC2P18074 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 AC013726.1-201ENST00000563747 2285 ntBASIC15.7■□□□□ 0.1
ERCC2P18074 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.7■□□□□ 0.1
ERCC2P18074 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
ERCC2P18074 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.7■□□□□ 0.1
ERCC2P18074 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
ERCC2P18074 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.7■□□□□ 0.1
ERCC2P18074 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.7■□□□□ 0.1
ERCC2P18074 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.7■□□□□ 0.1
ERCC2P18074 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.7■□□□□ 0.1
ERCC2P18074 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.7■□□□□ 0.1
ERCC2P18074 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.7■□□□□ 0.1
ERCC2P18074 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ERCC2P18074 AC027307.3-201ENST00000594262 1100 ntBASIC15.7■□□□□ 0.1
ERCC2P18074 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.7■□□□□ 0.1
ERCC2P18074 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.7■□□□□ 0.1
ERCC2P18074 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERCC2P18074 FGD5P1-202ENST00000614866 2498 ntBASIC15.7■□□□□ 0.1
ERCC2P18074 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.7■□□□□ 0.1
ERCC2P18074 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.7■□□□□ 0.1
ERCC2P18074 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.7■□□□□ 0.1
ERCC2P18074 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ERCC2P18074 AL137783.1-201ENST00000623494 1896 ntBASIC15.69■□□□□ 0.1
ERCC2P18074 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC2P18074 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
ERCC2P18074 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
ERCC2P18074 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC2P18074 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ERCC2P18074 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC2P18074 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC2P18074 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ERCC2P18074 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC2P18074 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC2P18074 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.69■□□□□ 0.1
ERCC2P18074 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.69■□□□□ 0.1
ERCC2P18074 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC2P18074 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC2P18074 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC2P18074 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ERCC2P18074 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms