Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.97□□□□□ -0.01
PCNAP12004 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PCNAP12004 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
PCNAP12004 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.97□□□□□ -0.01
PCNAP12004 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.97□□□□□ -0.01
PCNAP12004 KRT18P43-201ENST00000469825 1281 ntBASIC14.97□□□□□ -0.01
PCNAP12004 AC092183.1-201ENST00000469884 875 ntBASIC14.97□□□□□ -0.01
PCNAP12004 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCNAP12004 AC093214.1-201ENST00000511688 1107 ntBASIC14.97□□□□□ -0.01
PCNAP12004 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCNAP12004 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCNAP12004 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
PCNAP12004 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCNAP12004 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.97□□□□□ -0.01
PCNAP12004 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
PCNAP12004 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.97□□□□□ -0.01
PCNAP12004 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
PCNAP12004 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.97□□□□□ -0.01
PCNAP12004 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.97□□□□□ -0.01
PCNAP12004 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCNAP12004 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.97□□□□□ -0.01
PCNAP12004 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCNAP12004 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
PCNAP12004 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCNAP12004 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
PCNAP12004 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCNAP12004 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCNAP12004 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCNAP12004 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCNAP12004 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCNAP12004 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCNAP12004 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
PCNAP12004 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCNAP12004 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.97□□□□□ -0.01
PCNAP12004 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.97□□□□□ -0.01
PCNAP12004 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
PCNAP12004 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.96□□□□□ -0.01
PCNAP12004 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCNAP12004 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCNAP12004 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.96□□□□□ -0.01
PCNAP12004 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
PCNAP12004 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCNAP12004 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.96□□□□□ -0.01
PCNAP12004 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCNAP12004 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCNAP12004 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
PCNAP12004 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCNAP12004 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCNAP12004 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCNAP12004 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.96□□□□□ -0.01
PCNAP12004 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
PCNAP12004 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.96□□□□□ -0.01
PCNAP12004 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCNAP12004 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCNAP12004 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.96□□□□□ -0.01
PCNAP12004 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.96□□□□□ -0.01
PCNAP12004 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.96□□□□□ -0.01
PCNAP12004 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.96□□□□□ -0.01
PCNAP12004 AC135586.1-201ENST00000539323 574 ntBASIC14.96□□□□□ -0.01
PCNAP12004 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.96□□□□□ -0.01
PCNAP12004 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.96□□□□□ -0.01
PCNAP12004 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCNAP12004 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCNAP12004 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
PCNAP12004 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCNAP12004 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
PCNAP12004 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCNAP12004 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
PCNAP12004 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCNAP12004 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.96□□□□□ -0.02
PCNAP12004 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
PCNAP12004 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PCNAP12004 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PCNAP12004 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PCNAP12004 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
PCNAP12004 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PCNAP12004 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PCNAP12004 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCNAP12004 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.95□□□□□ -0.02
PCNAP12004 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCNAP12004 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.95□□□□□ -0.02
PCNAP12004 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCNAP12004 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.95□□□□□ -0.02
PCNAP12004 AC007191.1-201ENST00000623179 2995 ntBASIC14.95□□□□□ -0.02
PCNAP12004 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCNAP12004 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCNAP12004 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.95□□□□□ -0.02
PCNAP12004 AC013726.1-201ENST00000563747 2285 ntBASIC14.95□□□□□ -0.02
PCNAP12004 CICP4-201ENST00000447359 2812 ntBASIC14.95□□□□□ -0.02
PCNAP12004 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCNAP12004 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.95□□□□□ -0.02
PCNAP12004 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
PCNAP12004 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.95□□□□□ -0.02
PCNAP12004 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCNAP12004 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCNAP12004 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PCNAP12004 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCNAP12004 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.95□□□□□ -0.02
PCNAP12004 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCNAP12004 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms