Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
UBCP0CG48 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.47□□□□□ -0.25
UBCP0CG48 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.47□□□□□ -0.25
UBCP0CG48 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 AL080243.2-201ENST00000418783 582 ntBASIC13.47□□□□□ -0.25
UBCP0CG48 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
UBCP0CG48 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.47□□□□□ -0.25
UBCP0CG48 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.47□□□□□ -0.25
UBCP0CG48 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.47□□□□□ -0.25
UBCP0CG48 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.47□□□□□ -0.25
UBCP0CG48 MIR3687-2-201ENST00000577708 61 ntBASIC13.47□□□□□ -0.25
UBCP0CG48 MIR4453-201ENST00000584019 89 ntBASIC13.47□□□□□ -0.25
UBCP0CG48 AC025048.3-201ENST00000590609 569 ntBASIC13.47□□□□□ -0.25
UBCP0CG48 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.47□□□□□ -0.25
UBCP0CG48 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.47□□□□□ -0.25
UBCP0CG48 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.47□□□□□ -0.25
UBCP0CG48 MIR3687-1-201ENST00000614492 61 ntBASIC13.47□□□□□ -0.25
UBCP0CG48 AC005702.4-201ENST00000618393 416 ntBASIC13.47□□□□□ -0.25
UBCP0CG48 AP001059.3-201ENST00000619053 235 ntBASIC13.47□□□□□ -0.25
UBCP0CG48 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.47□□□□□ -0.25
UBCP0CG48 AL033527.5-202ENST00000641632 1098 ntBASIC13.47□□□□□ -0.25
UBCP0CG48 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.47□□□□□ -0.25
UBCP0CG48 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.47□□□□□ -0.25
UBCP0CG48 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.47□□□□□ -0.25
UBCP0CG48 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.47□□□□□ -0.25
UBCP0CG48 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
UBCP0CG48 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
UBCP0CG48 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.47□□□□□ -0.25
UBCP0CG48 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.47□□□□□ -0.25
UBCP0CG48 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
UBCP0CG48 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
UBCP0CG48 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.47□□□□□ -0.25
UBCP0CG48 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
UBCP0CG48 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UBCP0CG48 REXO1L4P-201ENST00000605109 1937 ntBASIC13.47□□□□□ -0.25
UBCP0CG48 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
UBCP0CG48 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBCP0CG48 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
UBCP0CG48 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBCP0CG48 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBCP0CG48 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
UBCP0CG48 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBCP0CG48 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
UBCP0CG48 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.46□□□□□ -0.25
UBCP0CG48 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBCP0CG48 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.46□□□□□ -0.25
UBCP0CG48 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.46□□□□□ -0.25
UBCP0CG48 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.46□□□□□ -0.25
UBCP0CG48 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBCP0CG48 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
UBCP0CG48 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBCP0CG48 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBCP0CG48 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
UBCP0CG48 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBCP0CG48 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBCP0CG48 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBCP0CG48 AC104457.1-201ENST00000401024 814 ntBASIC13.46□□□□□ -0.25
UBCP0CG48 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.46□□□□□ -0.25
UBCP0CG48 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.46□□□□□ -0.25
UBCP0CG48 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.46□□□□□ -0.25
UBCP0CG48 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.46□□□□□ -0.25
UBCP0CG48 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.46□□□□□ -0.25
UBCP0CG48 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.46□□□□□ -0.25
UBCP0CG48 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.46□□□□□ -0.25
UBCP0CG48 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.46□□□□□ -0.25
UBCP0CG48 AC025181.2-201ENST00000606994 802 ntBASIC13.46□□□□□ -0.25
UBCP0CG48 LINC00628-201ENST00000628516 1289 ntBASIC13.46□□□□□ -0.25
UBCP0CG48 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.46□□□□□ -0.25
UBCP0CG48 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBCP0CG48 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
UBCP0CG48 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.46□□□□□ -0.25
UBCP0CG48 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
UBCP0CG48 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
UBCP0CG48 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
UBCP0CG48 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
UBCP0CG48 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
UBCP0CG48 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
UBCP0CG48 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
UBCP0CG48 AC140479.7-201ENST00000636301 2332 ntBASIC13.46□□□□□ -0.26
UBCP0CG48 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
UBCP0CG48 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
UBCP0CG48 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
UBCP0CG48 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
UBCP0CG48 AC010327.5-201ENST00000586923 3061 ntBASIC13.45□□□□□ -0.26
UBCP0CG48 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBCP0CG48 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms