Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 MST1P2-201ENST00000457982 2291 ntBASIC12.74□□□□□ -0.37
CTSDP07339 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.74□□□□□ -0.37
CTSDP07339 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.74□□□□□ -0.37
CTSDP07339 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CTSDP07339 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CTSDP07339 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.73□□□□□ -0.37
CTSDP07339 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CTSDP07339 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.73□□□□□ -0.37
CTSDP07339 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
CTSDP07339 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.73□□□□□ -0.37
CTSDP07339 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.73□□□□□ -0.37
CTSDP07339 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
CTSDP07339 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CTSDP07339 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.73□□□□□ -0.37
CTSDP07339 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CTSDP07339 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.73□□□□□ -0.37
CTSDP07339 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.73□□□□□ -0.37
CTSDP07339 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.73□□□□□ -0.37
CTSDP07339 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
CTSDP07339 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.73□□□□□ -0.37
CTSDP07339 IGHV3-62-201ENST00000520057 340 ntBASIC12.73□□□□□ -0.37
CTSDP07339 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 AC034105.1-201ENST00000563488 319 ntBASIC12.73□□□□□ -0.37
CTSDP07339 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.73□□□□□ -0.37
CTSDP07339 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.73□□□□□ -0.37
CTSDP07339 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.73□□□□□ -0.37
CTSDP07339 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.73□□□□□ -0.37
CTSDP07339 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 AL513190.1-201ENST00000621254 727 ntBASIC12.73□□□□□ -0.37
CTSDP07339 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.73□□□□□ -0.37
CTSDP07339 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CTSDP07339 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.73□□□□□ -0.37
CTSDP07339 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.73□□□□□ -0.37
CTSDP07339 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CTSDP07339 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CTSDP07339 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.73□□□□□ -0.37
CTSDP07339 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.73□□□□□ -0.37
CTSDP07339 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.73□□□□□ -0.37
CTSDP07339 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSDP07339 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CTSDP07339 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.73□□□□□ -0.37
CTSDP07339 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.72□□□□□ -0.37
CTSDP07339 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.72□□□□□ -0.37
CTSDP07339 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSDP07339 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSDP07339 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSDP07339 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.72□□□□□ -0.37
CTSDP07339 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CTSDP07339 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSDP07339 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSDP07339 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.72□□□□□ -0.37
CTSDP07339 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSDP07339 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSDP07339 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
CTSDP07339 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CTSDP07339 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CTSDP07339 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSDP07339 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSDP07339 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CTSDP07339 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSDP07339 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CTSDP07339 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.72□□□□□ -0.37
CTSDP07339 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CTSDP07339 AL133267.1-201ENST00000398220 340 ntBASIC12.72□□□□□ -0.37
CTSDP07339 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSDP07339 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
CTSDP07339 AC007967.2-201ENST00000432613 625 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms