Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.41■□□□□ 0.22
TUBB4AP04350 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 AC018665.1-201ENST00000622927 1362 ntBASIC16.41■□□□□ 0.22
TUBB4AP04350 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.41■□□□□ 0.22
TUBB4AP04350 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.41■□□□□ 0.22
TUBB4AP04350 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TUBB4AP04350 SAPCD2P3-201ENST00000455031 850 ntBASIC16.41■□□□□ 0.22
TUBB4AP04350 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.41■□□□□ 0.22
TUBB4AP04350 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC16.41■□□□□ 0.22
TUBB4AP04350 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.41■□□□□ 0.22
TUBB4AP04350 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.41■□□□□ 0.22
TUBB4AP04350 AC023141.13-201ENST00000604991 943 ntBASIC16.41■□□□□ 0.22
TUBB4AP04350 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC16.41■□□□□ 0.22
TUBB4AP04350 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.41■□□□□ 0.22
TUBB4AP04350 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TUBB4AP04350 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
TUBB4AP04350 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.41■□□□□ 0.22
TUBB4AP04350 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBB4AP04350 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB4AP04350 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TUBB4AP04350 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC16.4■□□□□ 0.22
TUBB4AP04350 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB4AP04350 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB4AP04350 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TUBB4AP04350 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
TUBB4AP04350 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB4AP04350 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TUBB4AP04350 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB4AP04350 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC16.4■□□□□ 0.22
TUBB4AP04350 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB4AP04350 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB4AP04350 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.4■□□□□ 0.22
TUBB4AP04350 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB4AP04350 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB4AP04350 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB4AP04350 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB4AP04350 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.4■□□□□ 0.22
TUBB4AP04350 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.4■□□□□ 0.22
TUBB4AP04350 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB4AP04350 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB4AP04350 AZGP1P1-201ENST00000411909 902 ntBASIC16.4■□□□□ 0.22
TUBB4AP04350 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.4■□□□□ 0.22
TUBB4AP04350 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.4■□□□□ 0.22
TUBB4AP04350 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.4■□□□□ 0.22
TUBB4AP04350 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB4AP04350 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.4■□□□□ 0.22
TUBB4AP04350 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.4■□□□□ 0.22
TUBB4AP04350 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.4■□□□□ 0.22
TUBB4AP04350 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB4AP04350 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC16.4■□□□□ 0.22
TUBB4AP04350 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
TUBB4AP04350 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.4■□□□□ 0.22
TUBB4AP04350 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB4AP04350 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC16.4■□□□□ 0.22
TUBB4AP04350 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB4AP04350 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB4AP04350 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
TUBB4AP04350 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB4AP04350 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBB4AP04350 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
TUBB4AP04350 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
TUBB4AP04350 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
TUBB4AP04350 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TUBB4AP04350 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TUBB4AP04350 PTENP1-202ENST00000532280 3996 ntBASIC16.39■□□□□ 0.21
TUBB4AP04350 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TUBB4AP04350 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC16.39■□□□□ 0.21
TUBB4AP04350 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TUBB4AP04350 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TUBB4AP04350 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBB4AP04350 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.39■□□□□ 0.21
TUBB4AP04350 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
TUBB4AP04350 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.39■□□□□ 0.21
TUBB4AP04350 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
TUBB4AP04350 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TUBB4AP04350 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.39■□□□□ 0.21
TUBB4AP04350 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBB4AP04350 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.39■□□□□ 0.21
TUBB4AP04350 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TUBB4AP04350 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.39■□□□□ 0.21
TUBB4AP04350 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.39■□□□□ 0.21
TUBB4AP04350 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.39■□□□□ 0.21
TUBB4AP04350 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.39■□□□□ 0.21
TUBB4AP04350 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.39■□□□□ 0.21
TUBB4AP04350 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms