Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 AGER-206ENST00000375070 1463 ntTSL 5 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 AC012508.2-201ENST00000567613 1472 ntBASIC11.82□□□□□ -0.52
TRBV12-3P01733 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRBV12-3P01733 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRBV12-3P01733 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRBV12-3P01733 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRBV12-3P01733 TNRC18P2-201ENST00000417666 2714 ntBASIC11.81□□□□□ -0.52
TRBV12-3P01733 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRBV12-3P01733 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRBV12-3P01733 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRBV12-3P01733 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRBV12-3P01733 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRBV12-3P01733 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRBV12-3P01733 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRBV12-3P01733 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 MGST3-203ENST00000367885 680 ntTSL 2 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRBV12-3P01733 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRBV12-3P01733 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 AC093433.1-201ENST00000458048 571 ntBASIC11.81□□□□□ -0.52
TRBV12-3P01733 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 AC011495.1-201ENST00000498085 584 ntBASIC11.81□□□□□ -0.52
TRBV12-3P01733 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRBV12-3P01733 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 ENPP7P5-201ENST00000541031 1031 ntBASIC11.81□□□□□ -0.52
TRBV12-3P01733 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRBV12-3P01733 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 MIR5189-201ENST00000577370 114 ntBASIC11.81□□□□□ -0.52
TRBV12-3P01733 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 ATF5-205ENST00000600336 682 ntTSL 2 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 AL358472.5-202ENST00000641448 1267 ntBASIC11.81□□□□□ -0.52
TRBV12-3P01733 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRBV12-3P01733 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRBV12-3P01733 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC11.81□□□□□ -0.52
TRBV12-3P01733 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRBV12-3P01733 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRBV12-3P01733 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRBV12-3P01733 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRBV12-3P01733 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRBV12-3P01733 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC11.81□□□□□ -0.52
TRBV12-3P01733 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRBV12-3P01733 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC11.8□□□□□ -0.52
TRBV12-3P01733 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRBV12-3P01733 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.8□□□□□ -0.52
TRBV12-3P01733 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
TRBV12-3P01733 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TRBV12-3P01733 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
TRBV12-3P01733 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms