Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.54□□□□□ -0.56
LTAP01374 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LTAP01374 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
LTAP01374 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LTAP01374 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LTAP01374 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LTAP01374 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
LTAP01374 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LTAP01374 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LTAP01374 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
LTAP01374 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LTAP01374 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LTAP01374 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
LTAP01374 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC11.54□□□□□ -0.56
LTAP01374 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC11.54□□□□□ -0.56
LTAP01374 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.54□□□□□ -0.56
LTAP01374 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LTAP01374 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC11.54□□□□□ -0.56
LTAP01374 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
LTAP01374 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LTAP01374 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.53□□□□□ -0.56
LTAP01374 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11.53□□□□□ -0.56
LTAP01374 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC11.53□□□□□ -0.56
LTAP01374 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
LTAP01374 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
LTAP01374 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
LTAP01374 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.53□□□□□ -0.56
LTAP01374 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
LTAP01374 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
LTAP01374 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
LTAP01374 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC11.53□□□□□ -0.56
LTAP01374 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC11.53□□□□□ -0.56
LTAP01374 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
LTAP01374 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.53□□□□□ -0.56
LTAP01374 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
LTAP01374 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.53□□□□□ -0.56
LTAP01374 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
LTAP01374 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
LTAP01374 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 PTMS-202ENST00000389462 773 ntTSL 2 BASIC11.53□□□□□ -0.56
LTAP01374 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.53□□□□□ -0.56
LTAP01374 HIST3H2BA-201ENST00000436555 524 ntBASIC11.53□□□□□ -0.56
LTAP01374 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.53□□□□□ -0.56
LTAP01374 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC11.53□□□□□ -0.56
LTAP01374 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.53□□□□□ -0.56
LTAP01374 AC022447.6-201ENST00000515522 438 ntBASIC11.53□□□□□ -0.56
LTAP01374 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC11.53□□□□□ -0.56
LTAP01374 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC11.53□□□□□ -0.56
LTAP01374 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC11.53□□□□□ -0.56
LTAP01374 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC11.53□□□□□ -0.56
LTAP01374 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
LTAP01374 RNF34-208ENST00000555076 593 ntTSL 3 BASIC11.53□□□□□ -0.56
LTAP01374 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC11.53□□□□□ -0.56
LTAP01374 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC11.53□□□□□ -0.56
LTAP01374 SSH2-211ENST00000590153 570 ntTSL 4 BASIC11.53□□□□□ -0.56
LTAP01374 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
LTAP01374 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
LTAP01374 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC11.53□□□□□ -0.56
LTAP01374 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC11.53□□□□□ -0.56
LTAP01374 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
LTAP01374 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
LTAP01374 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
LTAP01374 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
LTAP01374 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
LTAP01374 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.53□□□□□ -0.56
LTAP01374 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
LTAP01374 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
LTAP01374 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.53□□□□□ -0.56
LTAP01374 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LTAP01374 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC11.53□□□□□ -0.56
LTAP01374 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LTAP01374 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms