Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TOP3BO95985 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.72■□□□□ 0.11
TOP3BO95985 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.72■□□□□ 0.11
TOP3BO95985 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TOP3BO95985 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TOP3BO95985 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.72■□□□□ 0.11
TOP3BO95985 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.72■□□□□ 0.11
TOP3BO95985 KLF2P4-201ENST00000451959 1225 ntBASIC15.72■□□□□ 0.11
TOP3BO95985 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.72■□□□□ 0.11
TOP3BO95985 AC024267.1-201ENST00000582320 895 ntBASIC15.72■□□□□ 0.11
TOP3BO95985 RN7SL190P-201ENST00000582519 257 ntBASIC15.72■□□□□ 0.11
TOP3BO95985 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.72■□□□□ 0.11
TOP3BO95985 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.72■□□□□ 0.11
TOP3BO95985 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.72■□□□□ 0.11
TOP3BO95985 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TOP3BO95985 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TOP3BO95985 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TOP3BO95985 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TOP3BO95985 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TOP3BO95985 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.72■□□□□ 0.11
TOP3BO95985 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.72■□□□□ 0.11
TOP3BO95985 AC148477.4-201ENST00000613430 1793 ntBASIC15.72■□□□□ 0.11
TOP3BO95985 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TOP3BO95985 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TOP3BO95985 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TOP3BO95985 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TOP3BO95985 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
TOP3BO95985 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TOP3BO95985 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TOP3BO95985 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TOP3BO95985 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.71■□□□□ 0.11
TOP3BO95985 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
TOP3BO95985 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TOP3BO95985 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TOP3BO95985 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TOP3BO95985 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TOP3BO95985 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TOP3BO95985 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.71■□□□□ 0.11
TOP3BO95985 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.71■□□□□ 0.11
TOP3BO95985 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TOP3BO95985 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TOP3BO95985 AC004987.2-201ENST00000395959 1148 ntBASIC15.71■□□□□ 0.11
TOP3BO95985 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.71■□□□□ 0.11
TOP3BO95985 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TOP3BO95985 KRT43P-201ENST00000434019 910 ntBASIC15.71■□□□□ 0.11
TOP3BO95985 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.71■□□□□ 0.11
TOP3BO95985 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.71■□□□□ 0.11
TOP3BO95985 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TOP3BO95985 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.71■□□□□ 0.11
TOP3BO95985 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.71■□□□□ 0.11
TOP3BO95985 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.71■□□□□ 0.11
TOP3BO95985 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.71■□□□□ 0.11
TOP3BO95985 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
TOP3BO95985 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.71■□□□□ 0.11
TOP3BO95985 AC243960.2-201ENST00000600996 747 ntBASIC15.71■□□□□ 0.11
TOP3BO95985 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TOP3BO95985 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.71■□□□□ 0.11
TOP3BO95985 AC126365.1-201ENST00000578585 1514 ntBASIC15.71■□□□□ 0.11
TOP3BO95985 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TOP3BO95985 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TOP3BO95985 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TOP3BO95985 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
TOP3BO95985 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TOP3BO95985 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.71■□□□□ 0.11
TOP3BO95985 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TOP3BO95985 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TOP3BO95985 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.71■□□□□ 0.11
TOP3BO95985 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TOP3BO95985 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TOP3BO95985 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TOP3BO95985 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TOP3BO95985 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TOP3BO95985 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
TOP3BO95985 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
TOP3BO95985 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TOP3BO95985 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TOP3BO95985 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TOP3BO95985 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TOP3BO95985 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TOP3BO95985 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TOP3BO95985 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TOP3BO95985 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TOP3BO95985 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
TOP3BO95985 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.7■□□□□ 0.1
TOP3BO95985 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TOP3BO95985 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TOP3BO95985 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.7■□□□□ 0.1
TOP3BO95985 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TOP3BO95985 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TOP3BO95985 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
TOP3BO95985 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TOP3BO95985 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TOP3BO95985 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.7■□□□□ 0.1
TOP3BO95985 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TOP3BO95985 MEP1AP4-201ENST00000423244 1087 ntBASIC15.7■□□□□ 0.1
TOP3BO95985 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.7■□□□□ 0.1
TOP3BO95985 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TOP3BO95985 CSF2RBP1-201ENST00000447905 391 ntBASIC15.7■□□□□ 0.1
TOP3BO95985 AC007551.1-201ENST00000457394 519 ntBASIC15.7■□□□□ 0.1
TOP3BO95985 HNRNPUP1-201ENST00000554987 333 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms