Protein–RNA interactions for Protein: O95447

LCA5L, Lebercilin-like protein, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5LO95447 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.21■□□□□ 0.19
LCA5LO95447 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LCA5LO95447 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LCA5LO95447 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
LCA5LO95447 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
LCA5LO95447 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LCA5LO95447 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.2■□□□□ 0.18
LCA5LO95447 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.2■□□□□ 0.18
LCA5LO95447 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.2■□□□□ 0.18
LCA5LO95447 AC011474.4-201ENST00000623523 2076 ntBASIC16.2■□□□□ 0.18
LCA5LO95447 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
LCA5LO95447 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LCA5LO95447 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
LCA5LO95447 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.2■□□□□ 0.18
LCA5LO95447 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.2■□□□□ 0.18
LCA5LO95447 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.2■□□□□ 0.18
LCA5LO95447 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LCA5LO95447 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.2■□□□□ 0.18
LCA5LO95447 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LCA5LO95447 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
LCA5LO95447 AL645937.2-201ENST00000396808 931 ntBASIC16.2■□□□□ 0.18
LCA5LO95447 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.2■□□□□ 0.18
LCA5LO95447 AL353779.1-201ENST00000434793 351 ntBASIC16.2■□□□□ 0.18
LCA5LO95447 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.2■□□□□ 0.18
LCA5LO95447 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.2■□□□□ 0.18
LCA5LO95447 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.2■□□□□ 0.18
LCA5LO95447 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.2■□□□□ 0.18
LCA5LO95447 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LCA5LO95447 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.2■□□□□ 0.18
LCA5LO95447 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LCA5LO95447 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
LCA5LO95447 AC073592.8-201ENST00000624126 511 ntBASIC16.2■□□□□ 0.18
LCA5LO95447 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.2■□□□□ 0.18
LCA5LO95447 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.2■□□□□ 0.18
LCA5LO95447 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.2■□□□□ 0.18
LCA5LO95447 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
LCA5LO95447 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCA5LO95447 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LCA5LO95447 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LCA5LO95447 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.19■□□□□ 0.18
LCA5LO95447 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.19■□□□□ 0.18
LCA5LO95447 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCA5LO95447 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCA5LO95447 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCA5LO95447 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LCA5LO95447 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCA5LO95447 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
LCA5LO95447 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
LCA5LO95447 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.19■□□□□ 0.18
LCA5LO95447 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LCA5LO95447 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.19■□□□□ 0.18
LCA5LO95447 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCA5LO95447 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LCA5LO95447 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LCA5LO95447 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.19■□□□□ 0.18
LCA5LO95447 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LCA5LO95447 AC114501.2-201ENST00000439631 535 ntBASIC16.19■□□□□ 0.18
LCA5LO95447 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.19■□□□□ 0.18
LCA5LO95447 AP006288.1-201ENST00000446065 395 ntBASIC16.19■□□□□ 0.18
LCA5LO95447 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.19■□□□□ 0.18
LCA5LO95447 AC109322.1-201ENST00000524499 1264 ntBASIC16.19■□□□□ 0.18
LCA5LO95447 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.19■□□□□ 0.18
LCA5LO95447 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.19■□□□□ 0.18
LCA5LO95447 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.19■□□□□ 0.18
LCA5LO95447 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCA5LO95447 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
LCA5LO95447 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LCA5LO95447 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.19■□□□□ 0.18
LCA5LO95447 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCA5LO95447 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.19■□□□□ 0.18
LCA5LO95447 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCA5LO95447 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCA5LO95447 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCA5LO95447 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.19■□□□□ 0.18
LCA5LO95447 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCA5LO95447 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCA5LO95447 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms