Protein–RNA interactions for Protein: O95405

ZFYVE9, Zinc finger FYVE domain-containing protein 9, humanhuman

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE9O95405 AC079112.1-201ENST00000454972 939 ntBASIC21.18■□□□□ 0.98
ZFYVE9O95405 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC21.18■□□□□ 0.98
ZFYVE9O95405 MRPL22P1-201ENST00000505398 616 ntBASIC21.18■□□□□ 0.98
ZFYVE9O95405 AC027237.1-201ENST00000560942 655 ntBASIC21.18■□□□□ 0.98
ZFYVE9O95405 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC21.18■□□□□ 0.98
ZFYVE9O95405 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC21.18■□□□□ 0.98
ZFYVE9O95405 MIR6769A-201ENST00000617340 73 ntBASIC21.18■□□□□ 0.98
ZFYVE9O95405 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZFYVE9O95405 AC126365.1-201ENST00000578585 1514 ntBASIC21.18■□□□□ 0.98
ZFYVE9O95405 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
ZFYVE9O95405 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZFYVE9O95405 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZFYVE9O95405 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC21.18■□□□□ 0.98
ZFYVE9O95405 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
ZFYVE9O95405 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE9O95405 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE9O95405 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE9O95405 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE9O95405 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE9O95405 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE9O95405 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE9O95405 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE9O95405 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ZFYVE9O95405 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC21.17■□□□□ 0.98
ZFYVE9O95405 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE9O95405 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE9O95405 ABR-203ENST00000536794 2213 ntTSL 2 BASIC21.17■□□□□ 0.98
ZFYVE9O95405 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC21.17■□□□□ 0.98
ZFYVE9O95405 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE9O95405 RNA5SP359-201ENST00000364838 113 ntBASIC21.17■□□□□ 0.98
ZFYVE9O95405 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE9O95405 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE9O95405 OR2R1P-201ENST00000441404 914 ntBASIC21.17■□□□□ 0.98
ZFYVE9O95405 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE9O95405 PIN4P1-201ENST00000451079 396 ntBASIC21.17■□□□□ 0.98
ZFYVE9O95405 CHCHD2P9-201ENST00000461726 456 ntBASIC21.17■□□□□ 0.98
ZFYVE9O95405 ORAOV1P1-201ENST00000503108 395 ntBASIC21.17■□□□□ 0.98
ZFYVE9O95405 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE9O95405 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC21.17■□□□□ 0.98
ZFYVE9O95405 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC21.17■□□□□ 0.98
ZFYVE9O95405 AC005357.2-202ENST00000590507 1060 ntBASIC21.17■□□□□ 0.98
ZFYVE9O95405 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC21.17■□□□□ 0.98
ZFYVE9O95405 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC21.17■□□□□ 0.98
ZFYVE9O95405 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE9O95405 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE9O95405 AC087481.3-201ENST00000602886 1894 ntBASIC21.17■□□□□ 0.98
ZFYVE9O95405 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE9O95405 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
ZFYVE9O95405 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE9O95405 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE9O95405 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE9O95405 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ZFYVE9O95405 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE9O95405 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE9O95405 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC21.16■□□□□ 0.98
ZFYVE9O95405 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC21.16■□□□□ 0.98
ZFYVE9O95405 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.16■□□□□ 0.98
ZFYVE9O95405 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC21.16■□□□□ 0.98
ZFYVE9O95405 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
ZFYVE9O95405 MBP-201ENST00000354542 575 ntTSL 2 BASIC21.16■□□□□ 0.98
ZFYVE9O95405 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE9O95405 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ZFYVE9O95405 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ZFYVE9O95405 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE9O95405 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC21.16■□□□□ 0.98
ZFYVE9O95405 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ZFYVE9O95405 DUTP3-201ENST00000450025 415 ntBASIC21.16■□□□□ 0.98
ZFYVE9O95405 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC21.16■□□□□ 0.98
ZFYVE9O95405 LINC01783-202ENST00000614408 828 ntBASIC21.16■□□□□ 0.98
ZFYVE9O95405 BX284668.2-205ENST00000619677 828 ntBASIC21.16■□□□□ 0.98
ZFYVE9O95405 AL161773.1-201ENST00000624845 863 ntBASIC21.16■□□□□ 0.98
ZFYVE9O95405 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC21.16■□□□□ 0.98
ZFYVE9O95405 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC21.16■□□□□ 0.98
ZFYVE9O95405 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ZFYVE9O95405 AC092850.2-201ENST00000623821 2697 ntBASIC21.16■□□□□ 0.98
ZFYVE9O95405 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE9O95405 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE9O95405 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE9O95405 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE9O95405 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE9O95405 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC21.15■□□□□ 0.98
ZFYVE9O95405 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE9O95405 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC21.15■□□□□ 0.98
ZFYVE9O95405 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC21.15■□□□□ 0.98
ZFYVE9O95405 AC012362.1-201ENST00000434906 739 ntBASIC21.15■□□□□ 0.98
ZFYVE9O95405 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC21.15■□□□□ 0.98
ZFYVE9O95405 FTH1P22-201ENST00000456305 520 ntBASIC21.15■□□□□ 0.98
ZFYVE9O95405 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC21.15■□□□□ 0.98
ZFYVE9O95405 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
ZFYVE9O95405 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC21.15■□□□□ 0.98
ZFYVE9O95405 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC21.15■□□□□ 0.98
ZFYVE9O95405 AC005041.3-201ENST00000606287 649 ntBASIC21.15■□□□□ 0.98
ZFYVE9O95405 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC21.15■□□□□ 0.98
ZFYVE9O95405 AC027601.3-201ENST00000622907 509 ntBASIC21.15■□□□□ 0.98
ZFYVE9O95405 AC073911.3-201ENST00000624401 631 ntBASIC21.15■□□□□ 0.98
ZFYVE9O95405 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC21.15■□□□□ 0.98
ZFYVE9O95405 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC21.15■□□□□ 0.98
ZFYVE9O95405 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE9O95405 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ZFYVE9O95405 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms