Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BEST1O76090 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.96■□□□□ 0.15
BEST1O76090 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.96■□□□□ 0.15
BEST1O76090 RPS2P32-201ENST00000439199 892 ntBASIC15.96■□□□□ 0.15
BEST1O76090 AC007274.1-201ENST00000439805 662 ntBASIC15.96■□□□□ 0.15
BEST1O76090 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BEST1O76090 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BEST1O76090 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.96■□□□□ 0.15
BEST1O76090 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.96■□□□□ 0.15
BEST1O76090 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.96■□□□□ 0.15
BEST1O76090 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
BEST1O76090 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.96■□□□□ 0.15
BEST1O76090 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.96■□□□□ 0.15
BEST1O76090 AC006453.4-201ENST00000636949 1252 ntBASIC15.96■□□□□ 0.15
BEST1O76090 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BEST1O76090 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BEST1O76090 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BEST1O76090 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.96■□□□□ 0.15
BEST1O76090 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BEST1O76090 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BEST1O76090 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BEST1O76090 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BEST1O76090 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BEST1O76090 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.96■□□□□ 0.15
BEST1O76090 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BEST1O76090 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
BEST1O76090 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
BEST1O76090 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BEST1O76090 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
BEST1O76090 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.14
BEST1O76090 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
BEST1O76090 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
BEST1O76090 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
BEST1O76090 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
BEST1O76090 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.96■□□□□ 0.14
BEST1O76090 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.96■□□□□ 0.14
BEST1O76090 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BEST1O76090 CLUHP2-201ENST00000426660 1303 ntBASIC15.95■□□□□ 0.14
BEST1O76090 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BEST1O76090 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BEST1O76090 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BEST1O76090 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
BEST1O76090 AC023090.2-201ENST00000625182 2110 ntBASIC15.95■□□□□ 0.14
BEST1O76090 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.95■□□□□ 0.14
BEST1O76090 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.95■□□□□ 0.14
BEST1O76090 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.95■□□□□ 0.14
BEST1O76090 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BEST1O76090 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BEST1O76090 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.95■□□□□ 0.14
BEST1O76090 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BEST1O76090 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BEST1O76090 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
BEST1O76090 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
BEST1O76090 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.95■□□□□ 0.14
BEST1O76090 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.95■□□□□ 0.14
BEST1O76090 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.95■□□□□ 0.14
BEST1O76090 TPM3P8-201ENST00000330554 643 ntBASIC15.95■□□□□ 0.14
BEST1O76090 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.95■□□□□ 0.14
BEST1O76090 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.95■□□□□ 0.14
BEST1O76090 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.95■□□□□ 0.14
BEST1O76090 MIR1202-201ENST00000408529 83 ntBASIC15.95■□□□□ 0.14
BEST1O76090 AC245100.3-201ENST00000441281 285 ntBASIC15.95■□□□□ 0.14
BEST1O76090 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.95■□□□□ 0.14
BEST1O76090 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BEST1O76090 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.95■□□□□ 0.14
BEST1O76090 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.95■□□□□ 0.14
BEST1O76090 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.95■□□□□ 0.14
BEST1O76090 AP003171.2-201ENST00000528208 925 ntBASIC15.95■□□□□ 0.14
BEST1O76090 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
BEST1O76090 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
BEST1O76090 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.95■□□□□ 0.14
BEST1O76090 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
BEST1O76090 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BEST1O76090 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.95■□□□□ 0.14
BEST1O76090 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BEST1O76090 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
BEST1O76090 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BEST1O76090 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.95■□□□□ 0.14
BEST1O76090 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
BEST1O76090 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
BEST1O76090 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BEST1O76090 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
BEST1O76090 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.95■□□□□ 0.14
BEST1O76090 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
BEST1O76090 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
BEST1O76090 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
BEST1O76090 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BEST1O76090 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.94■□□□□ 0.14
BEST1O76090 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
BEST1O76090 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
BEST1O76090 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BEST1O76090 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
BEST1O76090 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BEST1O76090 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BEST1O76090 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
BEST1O76090 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BEST1O76090 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.94■□□□□ 0.14
BEST1O76090 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.94■□□□□ 0.14
BEST1O76090 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
BEST1O76090 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms