Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.04■□□□□ 0.16
OPHN1O60890 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.04■□□□□ 0.16
OPHN1O60890 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.04■□□□□ 0.16
OPHN1O60890 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.04■□□□□ 0.16
OPHN1O60890 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
OPHN1O60890 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
OPHN1O60890 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
OPHN1O60890 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
OPHN1O60890 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.04■□□□□ 0.16
OPHN1O60890 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.04■□□□□ 0.16
OPHN1O60890 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
OPHN1O60890 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
OPHN1O60890 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
OPHN1O60890 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
OPHN1O60890 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.04■□□□□ 0.16
OPHN1O60890 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
OPHN1O60890 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.04■□□□□ 0.16
OPHN1O60890 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPHN1O60890 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPHN1O60890 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPHN1O60890 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
OPHN1O60890 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
OPHN1O60890 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPHN1O60890 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.03■□□□□ 0.16
OPHN1O60890 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
OPHN1O60890 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
OPHN1O60890 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
OPHN1O60890 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
OPHN1O60890 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPHN1O60890 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
OPHN1O60890 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPHN1O60890 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.03■□□□□ 0.16
OPHN1O60890 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
OPHN1O60890 AP005482.1-201ENST00000563722 1273 ntBASIC16.03■□□□□ 0.16
OPHN1O60890 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.03■□□□□ 0.16
OPHN1O60890 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.03■□□□□ 0.16
OPHN1O60890 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.03■□□□□ 0.16
OPHN1O60890 SRD5A3P1-201ENST00000603021 949 ntBASIC16.03■□□□□ 0.16
OPHN1O60890 AL033527.5-202ENST00000641632 1098 ntBASIC16.03■□□□□ 0.16
OPHN1O60890 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPHN1O60890 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.03■□□□□ 0.16
OPHN1O60890 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.03■□□□□ 0.16
OPHN1O60890 AC104581.4-201ENST00000623126 3052 ntBASIC16.03■□□□□ 0.16
OPHN1O60890 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPHN1O60890 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.03■□□□□ 0.16
OPHN1O60890 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.03■□□□□ 0.16
OPHN1O60890 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.03■□□□□ 0.16
OPHN1O60890 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPHN1O60890 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPHN1O60890 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.03■□□□□ 0.16
OPHN1O60890 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPHN1O60890 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
OPHN1O60890 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.03■□□□□ 0.16
OPHN1O60890 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
OPHN1O60890 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
OPHN1O60890 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPHN1O60890 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPHN1O60890 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPHN1O60890 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
OPHN1O60890 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
OPHN1O60890 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
OPHN1O60890 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.03■□□□□ 0.16
OPHN1O60890 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.03■□□□□ 0.16
OPHN1O60890 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
OPHN1O60890 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.03■□□□□ 0.16
OPHN1O60890 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.03■□□□□ 0.16
OPHN1O60890 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
OPHN1O60890 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.02■□□□□ 0.16
OPHN1O60890 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
OPHN1O60890 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
OPHN1O60890 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
OPHN1O60890 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
OPHN1O60890 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
OPHN1O60890 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
OPHN1O60890 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
OPHN1O60890 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
OPHN1O60890 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
OPHN1O60890 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
OPHN1O60890 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
OPHN1O60890 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.02■□□□□ 0.16
OPHN1O60890 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.02■□□□□ 0.16
OPHN1O60890 Z97205.2-201ENST00000564697 1639 ntBASIC16.02■□□□□ 0.16
OPHN1O60890 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
OPHN1O60890 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
OPHN1O60890 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
OPHN1O60890 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
OPHN1O60890 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
OPHN1O60890 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
OPHN1O60890 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
OPHN1O60890 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.02■□□□□ 0.16
OPHN1O60890 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
OPHN1O60890 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
OPHN1O60890 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
OPHN1O60890 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
OPHN1O60890 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
OPHN1O60890 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
OPHN1O60890 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
OPHN1O60890 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
OPHN1O60890 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.02■□□□□ 0.16
OPHN1O60890 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms