Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA12O60330 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA12O60330 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA12O60330 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PCDHGA12O60330 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA12O60330 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA12O60330 KRT8P35-201ENST00000483942 1338 ntBASIC15.17■□□□□ 0.02
PCDHGA12O60330 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGA12O60330 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGA12O60330 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGA12O60330 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGA12O60330 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 AL138799.1-201ENST00000448213 1675 ntBASIC15.17■□□□□ 0.02
PCDHGA12O60330 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PCDHGA12O60330 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PCDHGA12O60330 MIR648-201ENST00000385046 94 ntBASIC15.17■□□□□ 0.02
PCDHGA12O60330 SLC25A24P2-201ENST00000415059 510 ntBASIC15.17■□□□□ 0.02
PCDHGA12O60330 AC007969.1-201ENST00000433675 447 ntBASIC15.17■□□□□ 0.02
PCDHGA12O60330 AC004898.1-201ENST00000451057 766 ntBASIC15.17■□□□□ 0.02
PCDHGA12O60330 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PCDHGA12O60330 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGA12O60330 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGA12O60330 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGA12O60330 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGA12O60330 AC006453.4-201ENST00000636949 1252 ntBASIC15.17■□□□□ 0.02
PCDHGA12O60330 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGA12O60330 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGA12O60330 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGA12O60330 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGA12O60330 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGA12O60330 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGA12O60330 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGA12O60330 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA12O60330 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGA12O60330 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGA12O60330 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGA12O60330 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PCDHGA12O60330 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGA12O60330 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGA12O60330 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHGA12O60330 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHGA12O60330 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PCDHGA12O60330 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHGA12O60330 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGA12O60330 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGA12O60330 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.16■□□□□ 0.02
PCDHGA12O60330 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PCDHGA12O60330 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PCDHGA12O60330 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGA12O60330 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHGA12O60330 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGA12O60330 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA12O60330 RHOQP1-201ENST00000555758 579 ntBASIC15.16■□□□□ 0.02
PCDHGA12O60330 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGA12O60330 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.16■□□□□ 0.02
PCDHGA12O60330 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGA12O60330 BX539320.1-201ENST00000623759 877 ntBASIC15.16■□□□□ 0.02
PCDHGA12O60330 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms