Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.62□□□□□ -0.07
LCMT2O60294 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LCMT2O60294 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LCMT2O60294 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LCMT2O60294 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LCMT2O60294 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.61□□□□□ -0.07
LCMT2O60294 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LCMT2O60294 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.61□□□□□ -0.07
LCMT2O60294 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LCMT2O60294 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LCMT2O60294 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LCMT2O60294 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LCMT2O60294 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LCMT2O60294 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.61□□□□□ -0.07
LCMT2O60294 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LCMT2O60294 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LCMT2O60294 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LCMT2O60294 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
LCMT2O60294 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
LCMT2O60294 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LCMT2O60294 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.61□□□□□ -0.07
LCMT2O60294 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
LCMT2O60294 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
LCMT2O60294 AL139094.1-201ENST00000405549 1188 ntBASIC14.61□□□□□ -0.07
LCMT2O60294 KLF2P2-201ENST00000416807 1039 ntBASIC14.61□□□□□ -0.07
LCMT2O60294 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.61□□□□□ -0.07
LCMT2O60294 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.61□□□□□ -0.07
LCMT2O60294 AC114812.1-204ENST00000449669 728 ntBASIC14.61□□□□□ -0.07
LCMT2O60294 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.61□□□□□ -0.07
LCMT2O60294 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.61□□□□□ -0.07
LCMT2O60294 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LCMT2O60294 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.61□□□□□ -0.07
LCMT2O60294 TDH-203ENST00000531764 1110 ntBASIC14.61□□□□□ -0.07
LCMT2O60294 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.61□□□□□ -0.07
LCMT2O60294 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.61□□□□□ -0.07
LCMT2O60294 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.61□□□□□ -0.07
LCMT2O60294 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LCMT2O60294 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LCMT2O60294 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LCMT2O60294 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LCMT2O60294 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.61□□□□□ -0.07
LCMT2O60294 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LCMT2O60294 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.61□□□□□ -0.07
LCMT2O60294 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.61□□□□□ -0.07
LCMT2O60294 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.61□□□□□ -0.07
LCMT2O60294 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LCMT2O60294 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LCMT2O60294 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LCMT2O60294 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LCMT2O60294 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LCMT2O60294 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LCMT2O60294 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
LCMT2O60294 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LCMT2O60294 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
LCMT2O60294 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LCMT2O60294 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
LCMT2O60294 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCMT2O60294 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCMT2O60294 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.6□□□□□ -0.07
LCMT2O60294 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.6□□□□□ -0.07
LCMT2O60294 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.6□□□□□ -0.07
LCMT2O60294 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCMT2O60294 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
LCMT2O60294 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCMT2O60294 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCMT2O60294 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.6□□□□□ -0.07
LCMT2O60294 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCMT2O60294 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LCMT2O60294 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCMT2O60294 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCMT2O60294 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.6□□□□□ -0.07
LCMT2O60294 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.6□□□□□ -0.07
LCMT2O60294 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCMT2O60294 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LCMT2O60294 AL512384.1-201ENST00000406683 331 ntBASIC14.6□□□□□ -0.07
LCMT2O60294 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.6□□□□□ -0.07
LCMT2O60294 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.6□□□□□ -0.07
LCMT2O60294 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.6□□□□□ -0.07
LCMT2O60294 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LCMT2O60294 AC022137.2-201ENST00000503482 481 ntBASIC14.6□□□□□ -0.07
LCMT2O60294 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.6□□□□□ -0.07
LCMT2O60294 MIR5189-201ENST00000577370 114 ntBASIC14.6□□□□□ -0.07
LCMT2O60294 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.6□□□□□ -0.07
LCMT2O60294 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.6□□□□□ -0.07
LCMT2O60294 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LCMT2O60294 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LCMT2O60294 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.6□□□□□ -0.07
LCMT2O60294 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LCMT2O60294 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms