Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.14■□□□□ 0.33
ACTN4O43707 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.14■□□□□ 0.33
ACTN4O43707 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.14■□□□□ 0.33
ACTN4O43707 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.14■□□□□ 0.33
ACTN4O43707 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.14■□□□□ 0.33
ACTN4O43707 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.14■□□□□ 0.33
ACTN4O43707 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.14■□□□□ 0.33
ACTN4O43707 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ACTN4O43707 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
ACTN4O43707 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ACTN4O43707 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ACTN4O43707 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ACTN4O43707 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ACTN4O43707 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
ACTN4O43707 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.14■□□□□ 0.33
ACTN4O43707 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ACTN4O43707 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ACTN4O43707 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ACTN4O43707 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
ACTN4O43707 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.14■□□□□ 0.33
ACTN4O43707 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.13■□□□□ 0.33
ACTN4O43707 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTN4O43707 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ACTN4O43707 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTN4O43707 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ACTN4O43707 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTN4O43707 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTN4O43707 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ACTN4O43707 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTN4O43707 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ACTN4O43707 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.13■□□□□ 0.33
ACTN4O43707 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTN4O43707 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTN4O43707 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTN4O43707 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTN4O43707 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ACTN4O43707 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.13■□□□□ 0.33
ACTN4O43707 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.13■□□□□ 0.33
ACTN4O43707 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.13■□□□□ 0.33
ACTN4O43707 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.13■□□□□ 0.33
ACTN4O43707 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ACTN4O43707 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.13■□□□□ 0.33
ACTN4O43707 AC036164.1-201ENST00000570544 333 ntBASIC17.13■□□□□ 0.33
ACTN4O43707 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.13■□□□□ 0.33
ACTN4O43707 AC005498.2-205ENST00000593218 784 ntBASIC17.13■□□□□ 0.33
ACTN4O43707 AC106028.4-201ENST00000614509 607 ntBASIC17.13■□□□□ 0.33
ACTN4O43707 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ACTN4O43707 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTN4O43707 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTN4O43707 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTN4O43707 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTN4O43707 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTN4O43707 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.13■□□□□ 0.33
ACTN4O43707 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTN4O43707 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.13■□□□□ 0.33
ACTN4O43707 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ACTN4O43707 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTN4O43707 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.13■□□□□ 0.33
ACTN4O43707 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ACTN4O43707 AC097359.2-201ENST00000604992 2389 ntBASIC17.13■□□□□ 0.33
ACTN4O43707 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTN4O43707 AP001267.2-201ENST00000532619 2086 ntBASIC17.12■□□□□ 0.33
ACTN4O43707 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.12■□□□□ 0.33
ACTN4O43707 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
ACTN4O43707 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 AC113367.3-201ENST00000508316 1912 ntBASIC17.12■□□□□ 0.33
ACTN4O43707 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.12■□□□□ 0.33
ACTN4O43707 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ACTN4O43707 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ACTN4O43707 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 AL158070.2-201ENST00000623713 1621 ntBASIC17.12■□□□□ 0.33
ACTN4O43707 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ACTN4O43707 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
ACTN4O43707 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ACTN4O43707 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.12■□□□□ 0.33
ACTN4O43707 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ACTN4O43707 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
ACTN4O43707 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.12■□□□□ 0.33
ACTN4O43707 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.12■□□□□ 0.33
ACTN4O43707 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTN4O43707 RN7SL399P-201ENST00000471648 279 ntBASIC17.12■□□□□ 0.33
ACTN4O43707 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.12■□□□□ 0.33
ACTN4O43707 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
ACTN4O43707 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.12■□□□□ 0.33
ACTN4O43707 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
ACTN4O43707 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms