Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.62□□□□□ -0.07
CLOCKO15516 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.62□□□□□ -0.07
CLOCKO15516 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLOCKO15516 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.62□□□□□ -0.07
CLOCKO15516 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CLOCKO15516 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CLOCKO15516 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.61□□□□□ -0.07
CLOCKO15516 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.61□□□□□ -0.07
CLOCKO15516 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.61□□□□□ -0.07
CLOCKO15516 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.61□□□□□ -0.07
CLOCKO15516 REXO1L2P-201ENST00000425429 2069 ntBASIC14.61□□□□□ -0.07
CLOCKO15516 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
CLOCKO15516 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.61□□□□□ -0.07
CLOCKO15516 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.61□□□□□ -0.07
CLOCKO15516 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
CLOCKO15516 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
CLOCKO15516 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
CLOCKO15516 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CLOCKO15516 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 AL671277.1-201ENST00000429656 993 ntBASIC14.61□□□□□ -0.07
CLOCKO15516 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.61□□□□□ -0.07
CLOCKO15516 SPDYE11-202ENST00000450699 704 ntBASIC14.61□□□□□ -0.07
CLOCKO15516 CYMP-203ENST00000474680 1263 ntBASIC14.61□□□□□ -0.07
CLOCKO15516 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.61□□□□□ -0.07
CLOCKO15516 AC098859.1-201ENST00000502915 1238 ntBASIC14.61□□□□□ -0.07
CLOCKO15516 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.61□□□□□ -0.07
CLOCKO15516 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.61□□□□□ -0.07
CLOCKO15516 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.61□□□□□ -0.07
CLOCKO15516 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.61□□□□□ -0.07
CLOCKO15516 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.61□□□□□ -0.07
CLOCKO15516 SPDYE9P-201ENST00000570642 692 ntBASIC14.61□□□□□ -0.07
CLOCKO15516 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.61□□□□□ -0.07
CLOCKO15516 AC022145.2-201ENST00000598203 171 ntBASIC14.61□□□□□ -0.07
CLOCKO15516 SPDYE10P-202ENST00000612005 668 ntBASIC14.61□□□□□ -0.07
CLOCKO15516 SPDYE8P-202ENST00000612377 668 ntBASIC14.61□□□□□ -0.07
CLOCKO15516 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.61□□□□□ -0.07
CLOCKO15516 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.61□□□□□ -0.07
CLOCKO15516 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CLOCKO15516 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.61□□□□□ -0.07
CLOCKO15516 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.61□□□□□ -0.07
CLOCKO15516 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLOCKO15516 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.6□□□□□ -0.07
CLOCKO15516 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.6□□□□□ -0.07
CLOCKO15516 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLOCKO15516 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLOCKO15516 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLOCKO15516 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
CLOCKO15516 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.6□□□□□ -0.07
CLOCKO15516 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLOCKO15516 AC138969.2-201ENST00000532739 9932 ntBASIC14.6□□□□□ -0.07
CLOCKO15516 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.6□□□□□ -0.07
CLOCKO15516 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLOCKO15516 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLOCKO15516 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLOCKO15516 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLOCKO15516 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.6□□□□□ -0.07
CLOCKO15516 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLOCKO15516 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLOCKO15516 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.6□□□□□ -0.07
CLOCKO15516 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
CLOCKO15516 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLOCKO15516 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLOCKO15516 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CLOCKO15516 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CLOCKO15516 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CLOCKO15516 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLOCKO15516 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.6□□□□□ -0.07
CLOCKO15516 AL355306.1-201ENST00000415580 579 ntBASIC14.6□□□□□ -0.07
CLOCKO15516 AC005237.2-201ENST00000434368 219 ntBASIC14.6□□□□□ -0.07
CLOCKO15516 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms