Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC19.28■□□□□ 0.68
ABCC4O15439 AC114812.1-204ENST00000449669 728 ntBASIC19.28■□□□□ 0.68
ABCC4O15439 AL590640.2-201ENST00000457038 527 ntBASIC19.28■□□□□ 0.68
ABCC4O15439 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC19.28■□□□□ 0.68
ABCC4O15439 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC19.28■□□□□ 0.68
ABCC4O15439 LINC01101-201ENST00000622953 1884 ntBASIC19.28■□□□□ 0.68
ABCC4O15439 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ABCC4O15439 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ABCC4O15439 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ABCC4O15439 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ABCC4O15439 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ABCC4O15439 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC19.28■□□□□ 0.68
ABCC4O15439 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC19.28■□□□□ 0.68
ABCC4O15439 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ABCC4O15439 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ABCC4O15439 FGD5P1-202ENST00000614866 2498 ntBASIC19.28■□□□□ 0.68
ABCC4O15439 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ABCC4O15439 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.28■□□□□ 0.68
ABCC4O15439 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ABCC4O15439 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
ABCC4O15439 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ABCC4O15439 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ABCC4O15439 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ABCC4O15439 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC19.27■□□□□ 0.68
ABCC4O15439 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ABCC4O15439 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ABCC4O15439 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ABCC4O15439 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ABCC4O15439 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ABCC4O15439 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ABCC4O15439 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ABCC4O15439 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.27■□□□□ 0.68
ABCC4O15439 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC19.27■□□□□ 0.68
ABCC4O15439 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC19.27■□□□□ 0.68
ABCC4O15439 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
ABCC4O15439 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ABCC4O15439 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ABCC4O15439 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ABCC4O15439 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ABCC4O15439 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.27■□□□□ 0.68
ABCC4O15439 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC19.27■□□□□ 0.68
ABCC4O15439 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ABCC4O15439 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
ABCC4O15439 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
ABCC4O15439 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ABCC4O15439 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ABCC4O15439 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ABCC4O15439 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ABCC4O15439 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ABCC4O15439 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
ABCC4O15439 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ABCC4O15439 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC19.27■□□□□ 0.68
ABCC4O15439 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ABCC4O15439 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
ABCC4O15439 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ABCC4O15439 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
ABCC4O15439 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
ABCC4O15439 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
ABCC4O15439 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.67
ABCC4O15439 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ABCC4O15439 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCC4O15439 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCC4O15439 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.26■□□□□ 0.67
ABCC4O15439 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCC4O15439 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCC4O15439 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCC4O15439 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ABCC4O15439 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
ABCC4O15439 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCC4O15439 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ABCC4O15439 KRT18P25-201ENST00000508931 1278 ntBASIC19.26■□□□□ 0.67
ABCC4O15439 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ABCC4O15439 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.26■□□□□ 0.67
ABCC4O15439 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC19.26■□□□□ 0.67
ABCC4O15439 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ABCC4O15439 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC19.26■□□□□ 0.67
ABCC4O15439 PRKN-211ENST00000615065 261 ntTSL 5 BASIC19.26■□□□□ 0.67
ABCC4O15439 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC19.26■□□□□ 0.67
ABCC4O15439 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC19.26■□□□□ 0.67
ABCC4O15439 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ABCC4O15439 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC19.26■□□□□ 0.67
ABCC4O15439 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCC4O15439 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC19.26■□□□□ 0.67
ABCC4O15439 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCC4O15439 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCC4O15439 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ABCC4O15439 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCC4O15439 AC023090.2-201ENST00000625182 2110 ntBASIC19.26■□□□□ 0.67
ABCC4O15439 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCC4O15439 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCC4O15439 KRT8P35-201ENST00000483942 1338 ntBASIC19.26■□□□□ 0.67
ABCC4O15439 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ABCC4O15439 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCC4O15439 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.26■□□□□ 0.67
ABCC4O15439 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ABCC4O15439 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ABCC4O15439 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ABCC4O15439 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC19.26■□□□□ 0.67
ABCC4O15439 CICP23-201ENST00000605013 2741 ntBASIC19.26■□□□□ 0.67
ABCC4O15439 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms