Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDH17O14917 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH17O14917 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH17O14917 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PCDH17O14917 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH17O14917 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH17O14917 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH17O14917 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH17O14917 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH17O14917 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH17O14917 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH17O14917 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDH17O14917 INTS4P2-202ENST00000614726 2019 ntBASIC14.65□□□□□ -0.06
PCDH17O14917 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH17O14917 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH17O14917 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PCDH17O14917 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH17O14917 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PCDH17O14917 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH17O14917 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH17O14917 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH17O14917 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH17O14917 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH17O14917 LINC01101-201ENST00000622953 1884 ntBASIC14.64□□□□□ -0.07
PCDH17O14917 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH17O14917 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH17O14917 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH17O14917 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
PCDH17O14917 BOLA2P3-201ENST00000404566 256 ntBASIC14.64□□□□□ -0.07
PCDH17O14917 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH17O14917 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH17O14917 RN7SL837P-201ENST00000463010 287 ntBASIC14.64□□□□□ -0.07
PCDH17O14917 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH17O14917 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.64□□□□□ -0.07
PCDH17O14917 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDH17O14917 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDH17O14917 AC132938.2-201ENST00000579188 680 ntBASIC14.64□□□□□ -0.07
PCDH17O14917 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDH17O14917 AC093813.1-201ENST00000605066 256 ntBASIC14.64□□□□□ -0.07
PCDH17O14917 AC017083.2-201ENST00000608069 979 ntBASIC14.64□□□□□ -0.07
PCDH17O14917 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDH17O14917 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDH17O14917 AL591163.1-201ENST00000641757 987 ntBASIC14.64□□□□□ -0.07
PCDH17O14917 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH17O14917 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PCDH17O14917 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PCDH17O14917 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH17O14917 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH17O14917 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH17O14917 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDH17O14917 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH17O14917 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PCDH17O14917 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH17O14917 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDH17O14917 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH17O14917 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH17O14917 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH17O14917 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PCDH17O14917 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH17O14917 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH17O14917 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH17O14917 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PCDH17O14917 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH17O14917 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH17O14917 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDH17O14917 LINC00528-201ENST00000600723 2160 ntBASIC14.63□□□□□ -0.07
PCDH17O14917 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PCDH17O14917 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PCDH17O14917 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PCDH17O14917 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDH17O14917 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH17O14917 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH17O14917 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH17O14917 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDH17O14917 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.63□□□□□ -0.07
PCDH17O14917 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH17O14917 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.63□□□□□ -0.07
PCDH17O14917 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH17O14917 AC009486.1-201ENST00000569860 813 ntBASIC14.63□□□□□ -0.07
PCDH17O14917 AL049840.4-201ENST00000602422 811 ntBASIC14.63□□□□□ -0.07
PCDH17O14917 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH17O14917 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH17O14917 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDH17O14917 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH17O14917 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH17O14917 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PCDH17O14917 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDH17O14917 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH17O14917 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH17O14917 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
PCDH17O14917 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PCDH17O14917 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDH17O14917 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PCDH17O14917 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PCDH17O14917 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH17O14917 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PCDH17O14917 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH17O14917 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PCDH17O14917 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDH17O14917 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms