Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 KLF2P4-201ENST00000451959 1225 ntBASIC15.43■□□□□ 0.06
TRIM38O00635 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
TRIM38O00635 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRIM38O00635 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM38O00635 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.43■□□□□ 0.06
TRIM38O00635 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM38O00635 MIR4538-201ENST00000581377 78 ntBASIC15.43■□□□□ 0.06
TRIM38O00635 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.43■□□□□ 0.06
TRIM38O00635 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.43■□□□□ 0.06
TRIM38O00635 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM38O00635 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
TRIM38O00635 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRIM38O00635 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRIM38O00635 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.43■□□□□ 0.06
TRIM38O00635 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
TRIM38O00635 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
TRIM38O00635 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM38O00635 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRIM38O00635 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRIM38O00635 AC091951.1-201ENST00000512854 2465 ntBASIC15.42■□□□□ 0.06
TRIM38O00635 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM38O00635 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM38O00635 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
TRIM38O00635 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TRIM38O00635 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM38O00635 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM38O00635 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
TRIM38O00635 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM38O00635 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRIM38O00635 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM38O00635 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRIM38O00635 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM38O00635 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 BCRP2-202ENST00000447763 634 ntBASIC15.42■□□□□ 0.06
TRIM38O00635 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.42■□□□□ 0.06
TRIM38O00635 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.42■□□□□ 0.06
TRIM38O00635 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.42■□□□□ 0.06
TRIM38O00635 BCRP6-201ENST00000510112 632 ntBASIC15.42■□□□□ 0.06
TRIM38O00635 BCRP7-201ENST00000511549 544 ntBASIC15.42■□□□□ 0.06
TRIM38O00635 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.42■□□□□ 0.06
TRIM38O00635 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.42■□□□□ 0.06
TRIM38O00635 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.42■□□□□ 0.06
TRIM38O00635 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.42■□□□□ 0.06
TRIM38O00635 MIR4525-201ENST00000580000 75 ntBASIC15.42■□□□□ 0.06
TRIM38O00635 AL022328.1-201ENST00000610050 478 ntBASIC15.42■□□□□ 0.06
TRIM38O00635 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.42■□□□□ 0.06
TRIM38O00635 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM38O00635 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRIM38O00635 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.42■□□□□ 0.06
TRIM38O00635 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.42■□□□□ 0.06
TRIM38O00635 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.42■□□□□ 0.06
TRIM38O00635 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 PCDHA3-202ENST00000532566 4594 ntBASIC15.42■□□□□ 0.06
TRIM38O00635 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.42■□□□□ 0.06
TRIM38O00635 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM38O00635 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM38O00635 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM38O00635 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM38O00635 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM38O00635 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM38O00635 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRIM38O00635 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
TRIM38O00635 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM38O00635 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM38O00635 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms