Protein–RNA interactions for Protein: B2RUZ4

SMIM1, Small integral membrane protein 1, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1B2RUZ4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SMIM1B2RUZ4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC10.38□□□□□ -0.75
SMIM1B2RUZ4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SMIM1B2RUZ4 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
SMIM1B2RUZ4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SMIM1B2RUZ4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SMIM1B2RUZ4 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
SMIM1B2RUZ4 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SMIM1B2RUZ4 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 FO393414.2-201ENST00000405153 598 ntBASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 TARDBPP1-201ENST00000442013 1203 ntBASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 AP001005.1-201ENST00000571755 1248 ntBASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 AL691432.3-201ENST00000621860 400 ntBASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMIM1B2RUZ4 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 AP3S2-216ENST00000617003 1561 ntBASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 AC007967.2-201ENST00000432613 625 ntBASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 SPCS2P4-201ENST00000436160 681 ntBASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 HIST3H2BA-201ENST00000436555 524 ntBASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
SMIM1B2RUZ4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms