Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 AC006122.1-201ENST00000493323 440 ntBASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 AL031713.1-201ENST00000564813 661 ntBASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 AC144522.1-201ENST00000625111 1658 ntBASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 CYP2T1P-202ENST00000641596 2535 ntBASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC19.1■□□□□ 0.65
LOC102724428A0A0B4J2F2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 STK26-204ENST00000481105 1835 ntTSL 2 BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 API5-202ENST00000420461 2009 ntTSL 2 BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 AL645933.1-201ENST00000440087 609 ntBASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 CTBP2P4-201ENST00000513884 920 ntBASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 NAT9-220ENST00000582870 896 ntTSL 5 BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 HPN-206ENST00000597419 1212 ntTSL 5 BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 GMFG-209ENST00000600322 622 ntTSL 5 BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 AC027601.3-201ENST00000622907 509 ntBASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 AC009084.3-201ENST00000623356 437 ntBASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 RAN-210ENST00000541630 1475 ntTSL 2 BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LOC102724428A0A0B4J2F2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LOC102724428A0A0B4J2F2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.65
LOC102724428A0A0B4J2F2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
LOC102724428A0A0B4J2F2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LOC102724428A0A0B4J2F2 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LOC102724428A0A0B4J2F2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.08■□□□□ 0.65
LOC102724428A0A0B4J2F2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LOC102724428A0A0B4J2F2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.08■□□□□ 0.65
LOC102724428A0A0B4J2F2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC19.08■□□□□ 0.65
LOC102724428A0A0B4J2F2 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC19.08■□□□□ 0.65
LOC102724428A0A0B4J2F2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LOC102724428A0A0B4J2F2 FRMPD2B-201ENST00000431305 1347 ntBASIC19.08■□□□□ 0.65
LOC102724428A0A0B4J2F2 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC19.08■□□□□ 0.65
LOC102724428A0A0B4J2F2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC19.08■□□□□ 0.65
LOC102724428A0A0B4J2F2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LOC102724428A0A0B4J2F2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
LOC102724428A0A0B4J2F2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LOC102724428A0A0B4J2F2 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
LOC102724428A0A0B4J2F2 CYP4F23P-201ENST00000593402 1579 ntBASIC19.08■□□□□ 0.65
LOC102724428A0A0B4J2F2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LOC102724428A0A0B4J2F2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LOC102724428A0A0B4J2F2 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LOC102724428A0A0B4J2F2 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LOC102724428A0A0B4J2F2 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LOC102724428A0A0B4J2F2 NCR3-202ENST00000376071 541 ntTSL 5 BASIC19.08■□□□□ 0.64
LOC102724428A0A0B4J2F2 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC19.08■□□□□ 0.64
LOC102724428A0A0B4J2F2 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC19.08■□□□□ 0.64
LOC102724428A0A0B4J2F2 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms