Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP4B1Q9Y6B7 AP001059.3-201ENST00000619053 235 ntBASIC14.79□□□□□ -0.04
AP4B1Q9Y6B7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.79□□□□□ -0.04
AP4B1Q9Y6B7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.79□□□□□ -0.04
AP4B1Q9Y6B7 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP4B1Q9Y6B7 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP4B1Q9Y6B7 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP4B1Q9Y6B7 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP4B1Q9Y6B7 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
AP4B1Q9Y6B7 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP4B1Q9Y6B7 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP4B1Q9Y6B7 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.79□□□□□ -0.04
AP4B1Q9Y6B7 COL6A4P2-202ENST00000504443 2753 ntBASIC14.79□□□□□ -0.04
AP4B1Q9Y6B7 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP4B1Q9Y6B7 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP4B1Q9Y6B7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 AL512356.2-201ENST00000546955 174 ntBASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 AC087386.2-201ENST00000623212 4637 ntBASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 AL359881.3-201ENST00000602640 1721 ntBASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4B1Q9Y6B7 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
AP4B1Q9Y6B7 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AP4B1Q9Y6B7 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
AP4B1Q9Y6B7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AP4B1Q9Y6B7 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.77□□□□□ -0.04
AP4B1Q9Y6B7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP4B1Q9Y6B7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.77□□□□□ -0.04
AP4B1Q9Y6B7 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP4B1Q9Y6B7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.77□□□□□ -0.04
AP4B1Q9Y6B7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.77□□□□□ -0.04
AP4B1Q9Y6B7 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP4B1Q9Y6B7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
AP4B1Q9Y6B7 AL139400.1-201ENST00000366220 510 ntBASIC14.77□□□□□ -0.05
AP4B1Q9Y6B7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP4B1Q9Y6B7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
AP4B1Q9Y6B7 HLA-H-201ENST00000383620 1096 ntBASIC14.77□□□□□ -0.05
AP4B1Q9Y6B7 SPDYE7P-202ENST00000420373 878 ntBASIC14.77□□□□□ -0.05
AP4B1Q9Y6B7 PMS2P2-201ENST00000425039 1128 ntBASIC14.77□□□□□ -0.05
AP4B1Q9Y6B7 GPS2P2-201ENST00000430745 888 ntBASIC14.77□□□□□ -0.05
AP4B1Q9Y6B7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AP4B1Q9Y6B7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AP4B1Q9Y6B7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP4B1Q9Y6B7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
AP4B1Q9Y6B7 ALG1L8P-201ENST00000533887 760 ntBASIC14.77□□□□□ -0.05
AP4B1Q9Y6B7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.77□□□□□ -0.05
AP4B1Q9Y6B7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
AP4B1Q9Y6B7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.77□□□□□ -0.05
AP4B1Q9Y6B7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.77□□□□□ -0.05
AP4B1Q9Y6B7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.77□□□□□ -0.05
AP4B1Q9Y6B7 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.77□□□□□ -0.05
AP4B1Q9Y6B7 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
AP4B1Q9Y6B7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AP4B1Q9Y6B7 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP4B1Q9Y6B7 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AP4B1Q9Y6B7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.77□□□□□ -0.05
AP4B1Q9Y6B7 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms