Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 TCAF2P1-201ENST00000291129 2421 ntBASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 HLA-K-203ENST00000430151 1046 ntBASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 AC114812.1-204ENST00000449669 728 ntBASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 USP32P1-208ENST00000506594 1164 ntBASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 AC015936.2-201ENST00000593177 259 ntBASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 BCRP2-202ENST00000447763 634 ntBASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 KRT18P25-201ENST00000508931 1278 ntBASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 BCRP6-201ENST00000510112 632 ntBASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 BCRP7-201ENST00000511549 544 ntBASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 AP001889.1-201ENST00000525414 633 ntBASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PCDHGC4Q9Y5F7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms