Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 SOCS2P1-201ENST00000417727 557 ntBASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 AC012645.4-201ENST00000610691 1061 ntBASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 WFDC1-204ENST00000613603 549 ntBASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 REXO1L5P-201ENST00000622260 2098 ntBASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATG4BQ9Y4P1 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 RN7SL692P-201ENST00000464677 288 ntBASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 AP001582.1-201ENST00000525856 295 ntBASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 BX539320.1-201ENST00000623759 877 ntBASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATG4BQ9Y4P1 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms