Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 CTBP2P5-201ENST00000454986 1264 ntBASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 AC036164.1-201ENST00000570544 333 ntBASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 AL391069.4-201ENST00000609583 481 ntBASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC3AQ9Y2H6 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 ACTBP11-201ENST00000436287 1126 ntBASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 SLC25A47P1-201ENST00000531577 414 ntBASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 AL158212.4-201ENST00000624062 1286 ntBASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 AC020658.6-201ENST00000623564 1870 ntBASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 PPT1-215ENST00000641471 2368 ntBASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC3AQ9Y2H6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.68■□□□□ 0.1
FNDC3AQ9Y2H6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC3AQ9Y2H6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.68■□□□□ 0.1
FNDC3AQ9Y2H6 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
FNDC3AQ9Y2H6 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
FNDC3AQ9Y2H6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
FNDC3AQ9Y2H6 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC3AQ9Y2H6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
FNDC3AQ9Y2H6 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
FNDC3AQ9Y2H6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC3AQ9Y2H6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC3AQ9Y2H6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC3AQ9Y2H6 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC3AQ9Y2H6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.68■□□□□ 0.1
FNDC3AQ9Y2H6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.68■□□□□ 0.1
FNDC3AQ9Y2H6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC3AQ9Y2H6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC3AQ9Y2H6 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC3AQ9Y2H6 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC3AQ9Y2H6 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC3AQ9Y2H6 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms