Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSR3Q9UNL2 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
SSR3Q9UNL2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSR3Q9UNL2 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.71□□□□□ -0.22
SSR3Q9UNL2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
SSR3Q9UNL2 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.71□□□□□ -0.22
SSR3Q9UNL2 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SSR3Q9UNL2 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SSR3Q9UNL2 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSR3Q9UNL2 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSR3Q9UNL2 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.71□□□□□ -0.22
SSR3Q9UNL2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSR3Q9UNL2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
SSR3Q9UNL2 AL607033.1-201ENST00000623900 1599 ntBASIC13.71□□□□□ -0.22
SSR3Q9UNL2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSR3Q9UNL2 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SSR3Q9UNL2 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.7□□□□□ -0.22
SSR3Q9UNL2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 EEF1DP4-201ENST00000446006 880 ntBASIC13.7□□□□□ -0.22
SSR3Q9UNL2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 TPT1P11-201ENST00000458482 498 ntBASIC13.7□□□□□ -0.22
SSR3Q9UNL2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 CYP4F24P-201ENST00000586049 1580 ntBASIC13.7□□□□□ -0.22
SSR3Q9UNL2 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SSR3Q9UNL2 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
SSR3Q9UNL2 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSR3Q9UNL2 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR3Q9UNL2 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSR3Q9UNL2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SSR3Q9UNL2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSR3Q9UNL2 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR3Q9UNL2 AC012508.2-201ENST00000567613 1472 ntBASIC13.69□□□□□ -0.22
SSR3Q9UNL2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.69□□□□□ -0.22
SSR3Q9UNL2 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR3Q9UNL2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
SSR3Q9UNL2 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR3Q9UNL2 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SSR3Q9UNL2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SSR3Q9UNL2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR3Q9UNL2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.69□□□□□ -0.22
SSR3Q9UNL2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR3Q9UNL2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.69□□□□□ -0.22
SSR3Q9UNL2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.69□□□□□ -0.22
SSR3Q9UNL2 AC140658.5-201ENST00000438532 169 ntBASIC13.69□□□□□ -0.22
SSR3Q9UNL2 AL139010.1-201ENST00000454878 894 ntBASIC13.69□□□□□ -0.22
SSR3Q9UNL2 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.69□□□□□ -0.22
SSR3Q9UNL2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.69□□□□□ -0.22
SSR3Q9UNL2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR3Q9UNL2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.69□□□□□ -0.22
SSR3Q9UNL2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SSR3Q9UNL2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms