Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.06□□□□□ -0.16
LRFN1Q9P244 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.06□□□□□ -0.16
LRFN1Q9P244 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.06□□□□□ -0.16
LRFN1Q9P244 SAMD11P1-201ENST00000571429 661 ntBASIC14.06□□□□□ -0.16
LRFN1Q9P244 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.06□□□□□ -0.16
LRFN1Q9P244 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.06□□□□□ -0.16
LRFN1Q9P244 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.06□□□□□ -0.16
LRFN1Q9P244 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.06□□□□□ -0.16
LRFN1Q9P244 AC008687.7-202ENST00000637404 953 ntBASIC14.06□□□□□ -0.16
LRFN1Q9P244 PRSS30P-206ENST00000641773 873 ntBASIC14.06□□□□□ -0.16
LRFN1Q9P244 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LRFN1Q9P244 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.06□□□□□ -0.16
LRFN1Q9P244 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 TUBB1P2-201ENST00000422712 1306 ntBASIC14.06□□□□□ -0.16
LRFN1Q9P244 TUBB1P1-201ENST00000503144 1300 ntBASIC14.06□□□□□ -0.16
LRFN1Q9P244 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.06□□□□□ -0.16
LRFN1Q9P244 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.06□□□□□ -0.16
LRFN1Q9P244 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
LRFN1Q9P244 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 AC148477.4-201ENST00000613430 1793 ntBASIC14.06□□□□□ -0.16
LRFN1Q9P244 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.06□□□□□ -0.16
LRFN1Q9P244 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 AC009090.5-201ENST00000624886 2285 ntBASIC14.06□□□□□ -0.16
LRFN1Q9P244 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRFN1Q9P244 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LRFN1Q9P244 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRFN1Q9P244 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRFN1Q9P244 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRFN1Q9P244 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRFN1Q9P244 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRFN1Q9P244 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRFN1Q9P244 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRFN1Q9P244 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRFN1Q9P244 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRFN1Q9P244 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRFN1Q9P244 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRFN1Q9P244 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRFN1Q9P244 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRFN1Q9P244 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 AL139094.1-201ENST00000405549 1188 ntBASIC14.05□□□□□ -0.16
LRFN1Q9P244 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRFN1Q9P244 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 RNA5SP486-201ENST00000515961 83 ntBASIC14.05□□□□□ -0.16
LRFN1Q9P244 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRFN1Q9P244 AC078819.1-201ENST00000547454 765 ntBASIC14.05□□□□□ -0.16
LRFN1Q9P244 AC012085.1-201ENST00000548270 765 ntBASIC14.05□□□□□ -0.16
LRFN1Q9P244 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRFN1Q9P244 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRFN1Q9P244 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRFN1Q9P244 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRFN1Q9P244 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRFN1Q9P244 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRFN1Q9P244 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LRFN1Q9P244 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRFN1Q9P244 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.04□□□□□ -0.16
LRFN1Q9P244 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRFN1Q9P244 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRFN1Q9P244 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRFN1Q9P244 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.04□□□□□ -0.16
LRFN1Q9P244 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.04□□□□□ -0.16
LRFN1Q9P244 AL365203.3-201ENST00000609742 2057 ntBASIC14.04□□□□□ -0.16
LRFN1Q9P244 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRFN1Q9P244 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRFN1Q9P244 AC006001.1-201ENST00000325130 474 ntBASIC14.04□□□□□ -0.16
LRFN1Q9P244 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRFN1Q9P244 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.04□□□□□ -0.16
LRFN1Q9P244 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.04□□□□□ -0.16
LRFN1Q9P244 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LRFN1Q9P244 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.04□□□□□ -0.16
LRFN1Q9P244 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.04□□□□□ -0.16
LRFN1Q9P244 ACTBP11-201ENST00000436287 1126 ntBASIC14.04□□□□□ -0.16
LRFN1Q9P244 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.04□□□□□ -0.16
LRFN1Q9P244 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms