Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 AC234782.1-201ENST00000451950 919 ntBASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 AL160314.3-201ENST00000556041 767 ntBASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 AL137783.1-201ENST00000623494 1896 ntBASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 AC011270.2-201ENST00000624293 2550 ntBASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 SHC1P1-201ENST00000425230 1745 ntBASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRMT13Q9NUP7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 PUDPP3-201ENST00000445368 636 ntBASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 AC103988.2-201ENST00000561804 725 ntBASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 AC020922.3-201ENST00000595064 547 ntBASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRMT13Q9NUP7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 AC011840.2-201ENST00000563063 1520 ntBASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 DUX4L46-201ENST00000566845 751 ntBASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 AC018635.2-201ENST00000608625 364 ntBASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 AL353770.1-201ENST00000614915 403 ntBASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.6■□□□□ 0.25
TRMT13Q9NUP7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms