Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HPS4Q9NQG7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
HPS4Q9NQG7 AC067930.6-201ENST00000623257 4947 ntBASIC15.83■□□□□ 0.13
HPS4Q9NQG7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HPS4Q9NQG7 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HPS4Q9NQG7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.83■□□□□ 0.13
HPS4Q9NQG7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 AL591846.1-201ENST00000451736 433 ntBASIC15.83■□□□□ 0.12
HPS4Q9NQG7 AC104306.2-201ENST00000451877 341 ntBASIC15.83■□□□□ 0.12
HPS4Q9NQG7 KRT8P13-201ENST00000463294 1010 ntBASIC15.83■□□□□ 0.12
HPS4Q9NQG7 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 AC005695.3-201ENST00000614522 232 ntBASIC15.83■□□□□ 0.12
HPS4Q9NQG7 PRSS30P-206ENST00000641773 873 ntBASIC15.83■□□□□ 0.12
HPS4Q9NQG7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HPS4Q9NQG7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 BTBD6P1-201ENST00000412176 1267 ntBASIC15.82■□□□□ 0.12
HPS4Q9NQG7 CD8B2-202ENST00000417670 633 ntBASIC15.82■□□□□ 0.12
HPS4Q9NQG7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 AL022328.3-201ENST00000607943 679 ntBASIC15.82■□□□□ 0.12
HPS4Q9NQG7 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 AC126177.1-201ENST00000547829 2218 ntBASIC15.82■□□□□ 0.12
HPS4Q9NQG7 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HPS4Q9NQG7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms