Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CHD8Q9HCK8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CHD8Q9HCK8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 KRT8P6-201ENST00000399259 1207 ntBASIC13.83□□□□□ -0.2
CHD8Q9HCK8 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 CDK4P1-201ENST00000454213 828 ntBASIC13.83□□□□□ -0.2
CHD8Q9HCK8 ALG1L3P-201ENST00000503331 765 ntBASIC13.83□□□□□ -0.2
CHD8Q9HCK8 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 AC006058.4-201ENST00000624016 1670 ntBASIC13.83□□□□□ -0.2
CHD8Q9HCK8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 AC007292.2-201ENST00000593524 1812 ntBASIC13.83□□□□□ -0.2
CHD8Q9HCK8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CHD8Q9HCK8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 AC104961.1-201ENST00000427605 771 ntBASIC13.82□□□□□ -0.2
CHD8Q9HCK8 AL157407.1-201ENST00000435784 904 ntBASIC13.82□□□□□ -0.2
CHD8Q9HCK8 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 MT2A-202ENST00000561491 581 ntTSL 2 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 LINC02199-201ENST00000506655 2702 ntBASIC13.82□□□□□ -0.2
CHD8Q9HCK8 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 RN7SL23P-201ENST00000484055 275 ntBASIC13.82□□□□□ -0.2
CHD8Q9HCK8 AC026412.1-206ENST00000502273 206 ntBASIC13.82□□□□□ -0.2
CHD8Q9HCK8 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 AC013553.1-201ENST00000560906 267 ntBASIC13.82□□□□□ -0.2
CHD8Q9HCK8 RN7SL300P-201ENST00000582522 318 ntBASIC13.82□□□□□ -0.2
CHD8Q9HCK8 NF1P11-201ENST00000621292 1282 ntBASIC13.82□□□□□ -0.2
CHD8Q9HCK8 ST5-261ENST00000626808 1071 ntTSL 5 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHD8Q9HCK8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 AL121949.1-201ENST00000402043 968 ntBASIC13.81□□□□□ -0.2
CHD8Q9HCK8 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 ALG3P1-201ENST00000508806 1114 ntBASIC13.81□□□□□ -0.2
CHD8Q9HCK8 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms