Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 ACE3P-201ENST00000423435 1973 ntBASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SND1-IT1Q9HBX3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 AC098831.1-202ENST00000438821 336 ntBASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 AC061975.2-201ENST00000581722 295 ntBASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 AC148477.8-201ENST00000624298 468 ntBASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC10.31□□□□□ -0.76
SND1-IT1Q9HBX3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 AC092135.3-201ENST00000624151 1846 ntBASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SND1-IT1Q9HBX3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms