Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 RAB43P1-201ENST00000561790 589 ntBASIC17.98■□□□□ 0.47
RNF41Q9H4P4 AC025279.2-201ENST00000569730 653 ntBASIC17.98■□□□□ 0.47
RNF41Q9H4P4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 RN7SL48P-201ENST00000579283 293 ntBASIC17.98■□□□□ 0.47
RNF41Q9H4P4 GNRHR2-203ENST00000581100 1187 ntBASIC17.98■□□□□ 0.47
RNF41Q9H4P4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 AL137783.1-201ENST00000623494 1896 ntBASIC17.98■□□□□ 0.47
RNF41Q9H4P4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF41Q9H4P4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 AC091951.1-201ENST00000512854 2465 ntBASIC17.97■□□□□ 0.47
RNF41Q9H4P4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.97■□□□□ 0.47
RNF41Q9H4P4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 AC016694.1-201ENST00000434179 700 ntBASIC17.97■□□□□ 0.47
RNF41Q9H4P4 AC234783.1-201ENST00000441761 496 ntBASIC17.97■□□□□ 0.47
RNF41Q9H4P4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 AC132938.4-201ENST00000623835 848 ntBASIC17.97■□□□□ 0.47
RNF41Q9H4P4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.97■□□□□ 0.47
RNF41Q9H4P4 AC055811.4-201ENST00000624039 1754 ntBASIC17.96■□□□□ 0.47
RNF41Q9H4P4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 PKD1P5-201ENST00000532415 10291 ntBASIC17.96■□□□□ 0.47
RNF41Q9H4P4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.96■□□□□ 0.47
RNF41Q9H4P4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 AGAP7P-201ENST00000582299 2062 ntBASIC17.96■□□□□ 0.47
RNF41Q9H4P4 AGAP14-201ENST00000624701 2060 ntBASIC17.96■□□□□ 0.47
RNF41Q9H4P4 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.96■□□□□ 0.47
RNF41Q9H4P4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 AC112492.5-201ENST00000421897 457 ntBASIC17.96■□□□□ 0.47
RNF41Q9H4P4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 AC007551.1-201ENST00000457394 519 ntBASIC17.96■□□□□ 0.47
RNF41Q9H4P4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 FTH1P14-201ENST00000482930 551 ntBASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms