Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH11YQ9BZA8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH11YQ9BZA8 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PCDH11YQ9BZA8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH11YQ9BZA8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDH11YQ9BZA8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH11YQ9BZA8 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH11YQ9BZA8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH11YQ9BZA8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH11YQ9BZA8 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH11YQ9BZA8 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDH11YQ9BZA8 LILRP1-201ENST00000444199 1370 ntBASIC19.51■□□□□ 0.71
PCDH11YQ9BZA8 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH11YQ9BZA8 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDH11YQ9BZA8 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDH11YQ9BZA8 POU5F1P2-201ENST00000521750 823 ntBASIC19.51■□□□□ 0.71
PCDH11YQ9BZA8 CCNC-217ENST00000523985 958 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDH11YQ9BZA8 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDH11YQ9BZA8 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDH11YQ9BZA8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 AC136759.1-202ENST00000530858 2194 ntBASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 NPM1P43-201ENST00000558669 786 ntBASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 STUB1-204ENST00000564370 875 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 AL157813.1-201ENST00000612996 587 ntBASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 AC011491.1-203ENST00000637688 543 ntBASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDH11YQ9BZA8 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 CICP12-201ENST00000455801 843 ntBASIC19.49■□□□□ 0.71
PCDH11YQ9BZA8 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms