Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP3Q9BWW4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 AC005229.1-201ENST00000392885 409 ntBASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 RPL5P21-201ENST00000404620 815 ntBASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 BAATP1-201ENST00000412284 1225 ntBASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 GAPDHP40-201ENST00000505218 1006 ntBASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 KRT18P25-201ENST00000508931 1278 ntBASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 AL008721.1-201ENST00000609964 604 ntBASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 MIR6805-201ENST00000615055 62 ntBASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 BX539320.1-201ENST00000623759 877 ntBASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 AC134312.5-201ENST00000568031 1313 ntBASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SSBP3Q9BWW4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP3Q9BWW4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms