Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 AC023157.3-201ENST00000619086 2088 ntBASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 RNU1-114P-201ENST00000365297 166 ntBASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 FAM197Y7-201ENST00000432892 766 ntBASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 AC004066.1-201ENST00000502488 802 ntBASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 AC078819.1-201ENST00000547454 765 ntBASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 AC012085.1-201ENST00000548270 765 ntBASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 AC010328.2-201ENST00000597698 1111 ntBASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 AC006453.4-201ENST00000636949 1252 ntBASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRAIPQ9BWF2 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 AC007787.1-201ENST00000588095 1583 ntBASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 AP003680.1-201ENST00000598970 3660 ntBASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 AL139094.1-201ENST00000405549 1188 ntBASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAIPQ9BWF2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms