Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 KRT18P64-201ENST00000434946 1219 ntBASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 CR383656.12-201ENST00000549567 513 ntBASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 AL158212.4-201ENST00000624062 1286 ntBASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 CICP24-201ENST00000605464 2705 ntBASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 AC136604.1-201ENST00000418535 575 ntBASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 AC098850.1-201ENST00000419919 790 ntBASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 INE1-201ENST00000456273 945 ntBASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 ELK1P1-201ENST00000485699 580 ntBASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 CTBP2P3-201ENST00000585629 1255 ntBASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 OR2I1P-209ENST00000641730 5365 ntBASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 AC020658.6-201ENST00000623564 1870 ntBASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
PCGF1Q9BSM1 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms