Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
SDHCQ99643 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.17□□□□□ -0.3
SDHCQ99643 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SDHCQ99643 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.17□□□□□ -0.3
SDHCQ99643 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SDHCQ99643 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SDHCQ99643 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SDHCQ99643 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SDHCQ99643 FOXO1B-201ENST00000504678 1527 ntBASIC13.17□□□□□ -0.3
SDHCQ99643 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.17□□□□□ -0.3
SDHCQ99643 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SDHCQ99643 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SDHCQ99643 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SDHCQ99643 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SDHCQ99643 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SDHCQ99643 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SDHCQ99643 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SDHCQ99643 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SDHCQ99643 VENTXP1-201ENST00000569334 2716 ntBASIC13.17□□□□□ -0.3
SDHCQ99643 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SDHCQ99643 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
SDHCQ99643 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SDHCQ99643 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SDHCQ99643 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SDHCQ99643 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SDHCQ99643 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SDHCQ99643 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.16□□□□□ -0.3
SDHCQ99643 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.16□□□□□ -0.3
SDHCQ99643 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.16□□□□□ -0.3
SDHCQ99643 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SDHCQ99643 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.16□□□□□ -0.3
SDHCQ99643 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.16□□□□□ -0.3
SDHCQ99643 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.16□□□□□ -0.3
SDHCQ99643 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SDHCQ99643 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SDHCQ99643 MRPL20P1-201ENST00000400819 433 ntBASIC13.16□□□□□ -0.3
SDHCQ99643 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.16□□□□□ -0.3
SDHCQ99643 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.16□□□□□ -0.3
SDHCQ99643 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SDHCQ99643 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.16□□□□□ -0.3
SDHCQ99643 AC098859.1-201ENST00000502915 1238 ntBASIC13.16□□□□□ -0.3
SDHCQ99643 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
SDHCQ99643 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.16□□□□□ -0.3
SDHCQ99643 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.16□□□□□ -0.3
SDHCQ99643 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.16□□□□□ -0.3
SDHCQ99643 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.16□□□□□ -0.3
SDHCQ99643 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SDHCQ99643 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.16□□□□□ -0.3
SDHCQ99643 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.16□□□□□ -0.3
SDHCQ99643 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.16□□□□□ -0.3
SDHCQ99643 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
SDHCQ99643 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.16□□□□□ -0.3
SDHCQ99643 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.16□□□□□ -0.3
SDHCQ99643 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.16□□□□□ -0.3
SDHCQ99643 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.16□□□□□ -0.3
SDHCQ99643 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SDHCQ99643 CICP1-201ENST00000416803 2410 ntBASIC13.15□□□□□ -0.3
SDHCQ99643 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SDHCQ99643 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.15□□□□□ -0.3
SDHCQ99643 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SDHCQ99643 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.15□□□□□ -0.3
SDHCQ99643 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
SDHCQ99643 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SDHCQ99643 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SDHCQ99643 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.15□□□□□ -0.3
SDHCQ99643 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SDHCQ99643 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SDHCQ99643 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.15□□□□□ -0.3
SDHCQ99643 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SDHCQ99643 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
SDHCQ99643 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SDHCQ99643 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SDHCQ99643 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SDHCQ99643 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SDHCQ99643 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms