Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.83□□□□□ -0.36
CCL13Q99616 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CCL13Q99616 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CCL13Q99616 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCL13Q99616 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.83□□□□□ -0.36
CCL13Q99616 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.83□□□□□ -0.36
CCL13Q99616 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.83□□□□□ -0.36
CCL13Q99616 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CCL13Q99616 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL13Q99616 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CCL13Q99616 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL13Q99616 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
CCL13Q99616 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
CCL13Q99616 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CCL13Q99616 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL13Q99616 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
CCL13Q99616 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CCL13Q99616 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.82□□□□□ -0.36
CCL13Q99616 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.82□□□□□ -0.36
CCL13Q99616 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL13Q99616 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.82□□□□□ -0.36
CCL13Q99616 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.82□□□□□ -0.36
CCL13Q99616 INE1-201ENST00000456273 945 ntBASIC12.82□□□□□ -0.36
CCL13Q99616 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.82□□□□□ -0.36
CCL13Q99616 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.82□□□□□ -0.36
CCL13Q99616 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
CCL13Q99616 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.82□□□□□ -0.36
CCL13Q99616 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.82□□□□□ -0.36
CCL13Q99616 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CCL13Q99616 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC12.82□□□□□ -0.36
CCL13Q99616 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.82□□□□□ -0.36
CCL13Q99616 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.82□□□□□ -0.36
CCL13Q99616 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL13Q99616 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.82□□□□□ -0.36
CCL13Q99616 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.82□□□□□ -0.36
CCL13Q99616 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.82□□□□□ -0.36
CCL13Q99616 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL13Q99616 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL13Q99616 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
CCL13Q99616 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL13Q99616 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.81□□□□□ -0.36
CCL13Q99616 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CCL13Q99616 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CCL13Q99616 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.81□□□□□ -0.36
CCL13Q99616 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
CCL13Q99616 AL158070.2-201ENST00000623713 1621 ntBASIC12.81□□□□□ -0.36
CCL13Q99616 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.81□□□□□ -0.36
CCL13Q99616 OR2I1P-210ENST00000642037 4691 ntBASIC12.81□□□□□ -0.36
CCL13Q99616 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
CCL13Q99616 AC012508.2-201ENST00000567613 1472 ntBASIC12.81□□□□□ -0.36
CCL13Q99616 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms