Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
BBS4Q96RK4 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
BBS4Q96RK4 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
BBS4Q96RK4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
BBS4Q96RK4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
BBS4Q96RK4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BBS4Q96RK4 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
BBS4Q96RK4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BBS4Q96RK4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
BBS4Q96RK4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
BBS4Q96RK4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.56□□□□□ -0.08
BBS4Q96RK4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
BBS4Q96RK4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.56□□□□□ -0.08
BBS4Q96RK4 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
BBS4Q96RK4 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BBS4Q96RK4 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BBS4Q96RK4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BBS4Q96RK4 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
BBS4Q96RK4 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
BBS4Q96RK4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.55□□□□□ -0.08
BBS4Q96RK4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
BBS4Q96RK4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
BBS4Q96RK4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BBS4Q96RK4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BBS4Q96RK4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
BBS4Q96RK4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.55□□□□□ -0.08
BBS4Q96RK4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.55□□□□□ -0.08
BBS4Q96RK4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
BBS4Q96RK4 INGX-202ENST00000489074 768 ntBASIC14.55□□□□□ -0.08
BBS4Q96RK4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.55□□□□□ -0.08
BBS4Q96RK4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
BBS4Q96RK4 AC036164.1-201ENST00000570544 333 ntBASIC14.55□□□□□ -0.08
BBS4Q96RK4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.55□□□□□ -0.08
BBS4Q96RK4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.55□□□□□ -0.08
BBS4Q96RK4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BBS4Q96RK4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BBS4Q96RK4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
BBS4Q96RK4 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.55□□□□□ -0.08
BBS4Q96RK4 AC012508.2-201ENST00000567613 1472 ntBASIC14.55□□□□□ -0.08
BBS4Q96RK4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.55□□□□□ -0.08
BBS4Q96RK4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
BBS4Q96RK4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BBS4Q96RK4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BBS4Q96RK4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BBS4Q96RK4 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BBS4Q96RK4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
BBS4Q96RK4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
BBS4Q96RK4 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
BBS4Q96RK4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BBS4Q96RK4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
BBS4Q96RK4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
BBS4Q96RK4 CYMP-203ENST00000474680 1263 ntBASIC14.54□□□□□ -0.08
BBS4Q96RK4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 DOC2GP-202ENST00000514950 1163 ntBASIC14.54□□□□□ -0.08
BBS4Q96RK4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 TPRX2P-201ENST00000535362 881 ntBASIC14.54□□□□□ -0.08
BBS4Q96RK4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
BBS4Q96RK4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.54□□□□□ -0.08
BBS4Q96RK4 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.54□□□□□ -0.08
BBS4Q96RK4 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.54□□□□□ -0.08
BBS4Q96RK4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
BBS4Q96RK4 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.54□□□□□ -0.08
BBS4Q96RK4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
BBS4Q96RK4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
BBS4Q96RK4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
BBS4Q96RK4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BBS4Q96RK4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
BBS4Q96RK4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BBS4Q96RK4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
BBS4Q96RK4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
BBS4Q96RK4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
BBS4Q96RK4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
BBS4Q96RK4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
BBS4Q96RK4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
BBS4Q96RK4 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BBS4Q96RK4 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
BBS4Q96RK4 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
BBS4Q96RK4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
BBS4Q96RK4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms