Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 AC016397.2-201ENST00000624848 1985 ntBASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 AC069148.1-201ENST00000608741 768 ntBASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 AC084364.1-201ENST00000551967 1556 ntBASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
RAB3IPQ96QF0 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 AC004987.2-201ENST00000395959 1148 ntBASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 IGHV3-47-201ENST00000425060 335 ntBASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB3IPQ96QF0 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 KRT18P1-202ENST00000452408 1331 ntBASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 AC073439.1-201ENST00000624121 1774 ntBASIC14.96□□□□□ -0.01
RAB3IPQ96QF0 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms