Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 AC004466.1-201ENST00000599515 1080 ntBASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 AL451007.2-201ENST00000632004 563 ntBASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.74□□□□□ -0.37
CSMD1Q96PZ7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 VDAC1P1-201ENST00000439229 848 ntBASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 PGAM1P12-201ENST00000505622 748 ntBASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 AC073592.2-201ENST00000623062 780 ntBASIC12.73□□□□□ -0.37
CSMD1Q96PZ7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 AC010141.1-201ENST00000411585 623 ntBASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 AC244197.1-201ENST00000456494 951 ntBASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 AC093826.1-201ENST00000508655 993 ntBASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 AL157813.1-201ENST00000612996 587 ntBASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 Z98259.2-201ENST00000641583 609 ntBASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 AL354861.1-201ENST00000445213 355 ntBASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 PHKG1P2-201ENST00000457537 863 ntBASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 AC084752.1-201ENST00000509766 622 ntBASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 NUDT4P2-201ENST00000578341 546 ntBASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 AC091951.1-201ENST00000512854 2465 ntBASIC12.72□□□□□ -0.37
CSMD1Q96PZ7 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 KLF2P1-201ENST00000447438 1042 ntBASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC12.71□□□□□ -0.37
CSMD1Q96PZ7 DBP-202ENST00000593500 712 ntTSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms