Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 KRT8P13-201ENST00000463294 1010 ntBASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 OARD1-212ENST00000482515 832 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 CLUHP2-201ENST00000426660 1303 ntBASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC85AQ96PX6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.89■□□□□ 0.62
CCDC85AQ96PX6 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.89■□□□□ 0.62
CCDC85AQ96PX6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC85AQ96PX6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 AL137783.1-201ENST00000623494 1896 ntBASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 RPL5P21-201ENST00000404620 815 ntBASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 REXO1L4P-201ENST00000605109 1937 ntBASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC85AQ96PX6 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 ACTG1P17-201ENST00000558391 1119 ntBASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 AL645728.2-202ENST00000641679 227 ntBASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 AL360270.3-201ENST00000609118 1348 ntBASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC85AQ96PX6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC85AQ96PX6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC85AQ96PX6 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC85AQ96PX6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CCDC85AQ96PX6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC85AQ96PX6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms