Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 AL137783.1-201ENST00000623494 1896 ntBASIC16.16■□□□□ 0.18
ALPK3Q96L96 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.16■□□□□ 0.18
ALPK3Q96L96 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ALPK3Q96L96 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ALPK3Q96L96 MIR566-201ENST00000385187 94 ntBASIC16.15■□□□□ 0.18
ALPK3Q96L96 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ALPK3Q96L96 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.15■□□□□ 0.18
ALPK3Q96L96 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC16.15■□□□□ 0.18
ALPK3Q96L96 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ALPK3Q96L96 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.15■□□□□ 0.18
ALPK3Q96L96 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC16.15■□□□□ 0.18
ALPK3Q96L96 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.15■□□□□ 0.18
ALPK3Q96L96 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.15■□□□□ 0.18
ALPK3Q96L96 AC068867.1-201ENST00000559855 150 ntBASIC16.15■□□□□ 0.18
ALPK3Q96L96 HERC2P11-201ENST00000562845 725 ntBASIC16.15■□□□□ 0.18
ALPK3Q96L96 AC100756.2-201ENST00000569537 736 ntBASIC16.15■□□□□ 0.18
ALPK3Q96L96 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.15■□□□□ 0.18
ALPK3Q96L96 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.15■□□□□ 0.18
ALPK3Q96L96 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ALPK3Q96L96 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.15■□□□□ 0.18
ALPK3Q96L96 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ALPK3Q96L96 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ALPK3Q96L96 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.15■□□□□ 0.18
ALPK3Q96L96 AL359258.3-201ENST00000622910 2331 ntBASIC16.15■□□□□ 0.18
ALPK3Q96L96 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.15■□□□□ 0.18
ALPK3Q96L96 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.15■□□□□ 0.18
ALPK3Q96L96 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ALPK3Q96L96 CTBP2P8-201ENST00000422584 1330 ntBASIC16.15■□□□□ 0.18
ALPK3Q96L96 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ALPK3Q96L96 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.15■□□□□ 0.18
ALPK3Q96L96 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ALPK3Q96L96 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
ALPK3Q96L96 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.15■□□□□ 0.18
ALPK3Q96L96 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.15■□□□□ 0.18
ALPK3Q96L96 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ALPK3Q96L96 TLE1P1-201ENST00000422965 589 ntBASIC16.15■□□□□ 0.18
ALPK3Q96L96 RPL3P5-201ENST00000441645 1232 ntBASIC16.15■□□□□ 0.18
ALPK3Q96L96 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ALPK3Q96L96 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ALPK3Q96L96 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ALPK3Q96L96 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.15■□□□□ 0.18
ALPK3Q96L96 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.15■□□□□ 0.18
ALPK3Q96L96 RN7SL665P-201ENST00000578793 300 ntBASIC16.15■□□□□ 0.18
ALPK3Q96L96 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.15■□□□□ 0.18
ALPK3Q96L96 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ALPK3Q96L96 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.15■□□□□ 0.18
ALPK3Q96L96 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ALPK3Q96L96 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ALPK3Q96L96 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ALPK3Q96L96 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ALPK3Q96L96 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
ALPK3Q96L96 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ALPK3Q96L96 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.18
ALPK3Q96L96 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ALPK3Q96L96 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ALPK3Q96L96 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ALPK3Q96L96 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ALPK3Q96L96 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
ALPK3Q96L96 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ALPK3Q96L96 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ALPK3Q96L96 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ALPK3Q96L96 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ALPK3Q96L96 CTSL-202ENST00000342020 933 ntTSL 2 BASIC16.14■□□□□ 0.17
ALPK3Q96L96 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ALPK3Q96L96 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ALPK3Q96L96 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC16.14■□□□□ 0.17
ALPK3Q96L96 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC16.14■□□□□ 0.17
ALPK3Q96L96 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ALPK3Q96L96 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
ALPK3Q96L96 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ALPK3Q96L96 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ALPK3Q96L96 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ALPK3Q96L96 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ALPK3Q96L96 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ALPK3Q96L96 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ALPK3Q96L96 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.14■□□□□ 0.17
ALPK3Q96L96 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ALPK3Q96L96 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ALPK3Q96L96 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ALPK3Q96L96 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ALPK3Q96L96 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.14■□□□□ 0.17
ALPK3Q96L96 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ALPK3Q96L96 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ALPK3Q96L96 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ALPK3Q96L96 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ALPK3Q96L96 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ALPK3Q96L96 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.14■□□□□ 0.17
ALPK3Q96L96 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ALPK3Q96L96 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
ALPK3Q96L96 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ALPK3Q96L96 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.13■□□□□ 0.17
ALPK3Q96L96 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC16.13■□□□□ 0.17
ALPK3Q96L96 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.13■□□□□ 0.17
ALPK3Q96L96 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC16.13■□□□□ 0.17
ALPK3Q96L96 TREHP1-201ENST00000531328 465 ntBASIC16.13■□□□□ 0.17
ALPK3Q96L96 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC16.13■□□□□ 0.17
ALPK3Q96L96 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC16.13■□□□□ 0.17
ALPK3Q96L96 AC027601.3-201ENST00000622907 509 ntBASIC16.13■□□□□ 0.17
ALPK3Q96L96 CR392039.1-201ENST00000623217 204 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms