Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM5Q96HC4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 ENPP7P5-201ENST00000541031 1031 ntBASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 AL096865.1-201ENST00000606796 927 ntBASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 AC140479.7-201ENST00000636301 2332 ntBASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 AC068587.6-202ENST00000641839 5619 ntBASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 AC023090.2-201ENST00000625182 2110 ntBASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 AC067930.6-201ENST00000623257 4947 ntBASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM5Q96HC4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 AC007541.1-201ENST00000570282 1469 ntBASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 AC018665.1-201ENST00000622927 1362 ntBASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 AC026748.1-201ENST00000624349 3251 ntBASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 ACKR1-201ENST00000368121 1240 ntBASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 SOCS2P1-201ENST00000417727 557 ntBASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 AC098850.1-201ENST00000419919 790 ntBASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 AL359711.2-201ENST00000563105 872 ntBASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 SPDYE22P-201ENST00000582158 798 ntBASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 CHCHD2P3-201ENST00000603038 451 ntBASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 AC008761.3-201ENST00000624803 892 ntBASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.89□□□□□ -0.03
PDLIM5Q96HC4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms